renaud / neuroNER

named entity recognizer for neuronal cells, based on UIMA Ruta rules
GNU Lesser General Public License v3.0
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resolve discrepancy between Isocortex, and cerebral cortex in ABA ontology #45

Open stripathy opened 8 years ago

stripathy commented 8 years ago

the issue is that when most people say "cerebral cortex", they mean "neocortex" [Term] id: ABA_REGION:688 name: Cerebral cortex synonym: "Cortex cerebralis" [] synonym: "cerebral cortex" [] synonym: "pallium" [] synonym: "Cerebral cortex" [] synonym: "Cortex cerebri" [] synonym: "cortex" [] ! curator=RR synonym: "cortical" [] ! curator=RR ! in terms of text-mining, and what authors mean ! these regions should go with Isocortex

vs

[Term] id: ABA_REGION:315 name: Isocortex synonym: "dorsal area" [] synonym: "neopallium" [] synonym: "neocortex" [] synonym: "Cortex completus" [] synonym: "cerebral neocortex" [] synonym: "substantia corticalis" [] synonym: "neopallial cortex" [] synonym: "isocortex" [] synonym: "Isocortex" [] synonym: "homogenetic cortex" [] synonym: "Neocortex" [] synonym: "neocortical" [] ! curator=RR