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reneshbedre / bioinfokit

Bioinformatics data analysis and visualization toolkit
MIT License
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Can't install bioinfokit #38

Closed ZJJane closed 2 years ago

ZJJane commented 2 years ago

executed command: pip install --index-url https://pypi.tuna.tsinghua.edu.cn/simple/ bioinfokit

output: Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple/

WARNING: Ignoring invalid distribution -illow (f:\python3.8\lib\site-packages) WARNING: Ignoring invalid distribution -illow (f:\python3.8\lib\site-packages) WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', FileNotFoundError(2, 'No such file or directory'))': /simple/bioinfokit/ WARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', FileNotFoundError(2, 'No such file or directory'))': /simple/bioinfokit/ WARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', FileNotFoundError(2, 'No such file or directory'))': /simple/bioinfokit/ WARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', FileNotFoundError(2, 'No such file or directory'))': /simple/bioinfokit/ WARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProxyError('Cannot connect to proxy.', FileNotFoundError(2, 'No such file or directory'))': /simple/bioinfokit/ ERROR: Could not find a version that satisfies the requirement bioinfokit (from versions: none) ERROR: No matching distribution found for bioinfokit WARNING: Ignoring invalid distribution -illow (f:\python3.8\lib\site-packages) WARNING: Ignoring invalid distribution -illow (f:\python3.8\lib\site-packages)

executed command: easy_install bioinfokit

output: WARNING: The easy_install command is deprecated and will be removed in a future version. Searching for bioinfokit Reading https://pypi.org/simple/bioinfokit/ Downloading https://files.pythonhosted.org/packages/e1/32/e1581d40b9e1f88c496b854002ab00f45c47880909f8a529ced2e7ea7314/bioinfokit-2.0.6.tar.gz#sha256=5552eecd98f3ad90bc39939bfbb50a933c7b0a4159360bc386555795c035e8e3 Best match: bioinfokit 2.0.6 Processing bioinfokit-2.0.6.tar.gz Writing C:\Users\MSI\AppData\Local\Temp\easy_install-sjpi64h8\bioinfokit-2.0.6\setup.cfg Running bioinfokit-2.0.6\setup.py -q bdist_egg --dist-dir C:\Users\MSI\AppData\Local\Temp\easy_install-sjpi64h8\bioinfokit-2.0.6\egg-dist-tmp-gju5ypax Traceback (most recent call last): File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 154, in save_modules yield saved File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 195, in setup_context yield File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 45, in _execfile exec(code, globals, locals) File "C:\Users\MSI\AppData\Local\Temp\easy_install-sjpi64h8\bioinfokit-2.0.6\setup.py", line 5, in UnicodeDecodeError: 'gbk' codec can't decode byte 0xa6 in position 63494: illegal multibyte sequence

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "f:\python3.8\lib\runpy.py", line 194, in _run_module_as_main return _run_code(code, main_globals, None, File "f:\python3.8\lib\runpy.py", line 87, in _run_code exec(code, run_globals) File "F:\python3.8\Scripts\easy_install.exe__main.py", line 7, in File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 2307, in main setup( File "f:\python3.8\lib\site-packages\setuptools__init__.py", line 165, in setup return distutils.core.setup(**attrs) File "f:\python3.8\lib\distutils\core.py", line 148, in setup dist.run_commands() File "f:\python3.8\lib\distutils\dist.py", line 966, in run_commands self.run_command(cmd) File "f:\python3.8\lib\distutils\dist.py", line 985, in run_command cmd_obj.run() File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 425, in run self.easy_install(spec, not self.no_deps) File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 686, in easy_install return self.install_item(spec, dist.location, tmpdir, deps) File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 712, in install_item dists = self.install_eggs(spec, download, tmpdir) File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 897, in install_eggs return self.build_and_install(setup_script, setup_base) File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 1167, in build_and_install self.run_setup(setup_script, setup_base, args) File "f:\python3.8\lib\site-packages\setuptools\command\easy_install.py", line 1151, in run_setup run_setup(setup_script, args) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 253, in run_setup raise File "f:\python3.8\lib\contextlib.py", line 131, in exit__ self.gen.throw(type, value, traceback) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 195, in setup_context yield File "f:\python3.8\lib\contextlib.py", line 131, in exit self.gen.throw(type, value, traceback) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 166, in save_modules saved_exc.resume() File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 141, in resume six.reraise(type, exc, self._tb) File "f:\python3.8\lib\site-packages\setuptools_vendor\six.py", line 685, in reraise raise value.with_traceback(tb) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 154, in save_modules yield saved File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 195, in setup_context yield File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "f:\python3.8\lib\site-packages\setuptools\sandbox.py", line 45, in _execfile exec(code, globals, locals) File "C:\Users\MSI\AppData\Local\Temp\easy_install-sjpi64h8\bioinfokit-2.0.6\setup.py", line 5, in UnicodeDecodeError: 'gbk' codec can't decode byte 0xa6 in position 63494: illegal multibyte sequence

OS: Windows10 Python version: 3.8

ZJJane commented 2 years ago

I found the way to fix it. https://github.com/sshwsfc/xadmin/issues/330