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reneshbedre / bioinfokit

Bioinformatics data analysis and visualization toolkit
MIT License
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marker size and shape in bioinfokit.visuz.cluster.pcaplot #56

Open amir-tagh opened 1 year ago

amir-tagh commented 1 year ago

Hello,

I am using cluster.pcaplot to plot 2D and 3D plots for a set of data. Is there any option for marker size and marker shape that I can use? currently marker labels overlap and they are not distinguishable.

Thanks, Amir

cluster.pcaplot(x=loadings[0], y=loadings[1],show=True,plotlabels=True,axlabelfontsize=20,labels=df.columns.values,
var1=round(pca_out.explained_varianceratio[0]100, 2), var2=round(pca_out.explained_varianceratio[1]100, 2))

reneshbedre commented 1 year ago

Currently, you can not change the marker shape/color for PCA plots. I will add this request to my development list. Thank you.