reneshbedre / bioinfokit

Bioinformatics data analysis and visualization toolkit
MIT License
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gff3 to gtf file conversion #66

Open rbadmi opened 1 year ago

rbadmi commented 1 year ago

Hello,

I am trying to convert my gff3 file to gtf file to be able to use it in HTseq or featurecounts. I am constantly getting the same error

SyntaxError: positional argument follows keyword argument

This is the code I am using: gff.gff_to_gtf(file="Fragaria_ananassa_v1.0.a2.genes.gff3", trn_feature_name)

Could anyone help me in this? Thank you.

Kind regards, Raghu