Dear NMF developer,
Thank you for sharing this useful tool. I tried to use ' res.list <- nmf(data, rank = range, nrun = 10, seed = 'ica', method = 'nsNMF')' on single cell data, and I got an Error:
Error in (function (...) : All the runs produced an error:
-#1 [r=5] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#2 [r=6] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#3 [r=7] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#4 [r=8] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#5 [r=9] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#6 [r=10] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790368 x 21313 exceeds Fortran indexing limits
-#7 [r=11] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
run #1: svd on 1215790
Calls: nmf ... .local -> nmfEstimateRank -> do.call ->
Execution halted
I have no clue what happened, could you help me?
Dear NMF developer, Thank you for sharing this useful tool. I tried to use ' res.list <- nmf(data, rank = range, nrun = 10, seed = 'ica', method = 'nsNMF')' on single cell data, and I got an Error: Error in (function (...) : All the runs produced an error: -#1 [r=5] -> NMF::nmf - 10/10 fit(s) threw an error.
Error(s) thrown:
Error(s) thrown:
Error(s) thrown:
Error(s) thrown:
Error(s) thrown:
Error(s) thrown:
Error(s) thrown: