auto detect if fastq_pass was basecalled or not

replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data

https://case-group.github.io/

GNU General Public License v3.0

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Closed replikation closed 3 years ago

replikation commented 3 years ago

might be useful if a user supplies --fastq_pass fastq_dir/ that it starts demultiplexing with a guppy CPU container (for compatibility reasons) if it can detect barcode??/