This should also be usable with 1 cpu
(related: #122)
[d5/65e471] process > get_fasta [100%] 1 of 1, cached: 1 ✔
[f7/f37eb3] process > split_fasta [100%] 1 of 1, failed: 1
[- ] process > determine_lineage_wf:pangolin -
[- ] process > determine_mutations_wf:nextclade -
[- ] process > genome_quality_wf:president -
[- ] process > genome_quality_wf:seqrs -
[- ] process > rki_report_wf:rki_report -
[- ] process > create_summary_report_wf:summary_report_fasta -
Error executing process > 'split_fasta'
Caused by:
Process requirement exceed available CPUs -- req: 4; avail: 1
Command executed:
mkdir -p split_fasta
split_fasta.py SARSCoV2.fasta
Command exit status:
-
Command output:
(empty)
Work dir:
/data/mahlzeitlocal/sebastian/porecov_dev/work/nextflow-poreCov-ya86gul/f7/f37eb38dc21d18b9654ed3b8d05a4e
Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`
This should also be usable with 1 cpu (related: #122)