Closed iferres closed 3 years ago
nextflow run replikation/poreCov -b fix134 (...)
thanks again
PS: i added nanopolish to the dry run so this will not happen again
Hi, sorry for the delay. My colleague just told me it worked, so thanks again for your time. Bests! Ignacio
Greetings! Hope you are doing well.
I think I found a bug. We were getting the following error when running the
--nanopolish
wf:Access to 'artic_medaka.out' is undefined since process doesn't declare any output
Probably the bug is here: https://github.com/replikation/poreCov/blob/ad970dce96da039e1e63ad66db0cdd92b070212f/workflows/artic_nanopore_nCov19.nf#L54