Closed replikation closed 3 years ago
test is running...
nextflow run replikation/poreCov -r fix134 --nanopolish --fast5 fast5_pass --cachedir /scratch/singularity/poreCov --update -w work --cores 40 --max_cores 120 --krakendb /mnt/scratch_slow04/sc2/common/databases/kraken2/GRCh38.p13_SC2_2021-02-08.tar.gz -profile local,singularity --output results_nanopolish_test