replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data
https://case-group.github.io/
GNU General Public License v3.0
39 stars 16 forks source link

Consider addition of "Variable"-tool #156

Closed DataSpott closed 2 years ago

DataSpott commented 2 years ago

Examine possibility of adding "Variable" to poreCov for identification of intra-host lineage-variants with low allel-frequency. Could be useful for the result to see if other lineages are present in the sample too. Link to gitlab: https://gitlab.com/treangenlab/variabel

replikation commented 2 years ago