replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data
https://case-group.github.io/
GNU General Public License v3.0
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fix output channel for nanopolish #171

Closed hoelzer closed 2 years ago

hoelzer commented 2 years ago

It seems no one was using nanopolish for a while ;)

The output channel for the coverage depth files needed adjustment, similar to the default medaka process a while ago. The files were renamed in some ARTIC update.

Works for me, just did a run with nanopolish. So ready to merge and doing a minor release from my side.

replikation commented 2 years ago

ah thanks