improve table style

[replikation]

with all the features and columns the table stretches too much downwards (e.g. it's one line for each mutation currently). makes it a slight scrolling nightmare for > 40 samples

Proposals:

• reduce font sizes of mutations or group them into ORF1a: etc.
• combine results of %reads into one column
• combine Constellation(conflict) and Clade into one column

[replikation]

• and yes i know we have tons of omicron spike mutations in the tables currently ;)

[hoelzer]

• and yes i know we have tons of omicron spike mutations in the tables currently ;)

:) But yes, fully agree. It's nice to have all this information but the table gets super long.

[RaverJay]

imho you just need wider screens ;)

reducing font size is most feasible I guess?

[replikation]

but whats the maximum scale? its not automatically scaling on the x axis e.g. here

a good way would be auto-scaling and forced 10% space on left and right

[hoelzer]

Can we make the column with the mutations extendable? The table gets so long because we have especially with Omicron now so many mutations. Not sure if this is somehow possible with the python backend of the HTML report ;)

[replikation]

we might want to add a column "hide" feature like here: https://datatables.net/examples/api/show_hide.html

[MarieLataretu]

Hmm, maybe this is also a helpful element:

click here to expand

Hello World!

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[replikation]

yeah. keep an overview but "hide" / "unhide" mutations

[RaverJay]

Hmm, maybe this is also a helpful element: click here to expand

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Was thinking about this one too

[hoelzer]

Can we then add a single button to hide/unhide all columns? Sometimes it's neat to scroll over the HTML even if it's long (e.g. so I discovered the BA.1 weirdos w/th the 5-vs-6-nt deletion).

Also would be nice if one can still search via crtl-F e.g. "E484A" but I think this is also possible w/ the hiddn content

[RaverJay]

how about this?

[replikation]

uh nice. really like it (the barcode 16 style, because table has more columns when using poreCov from reads)

would extend it to the deletions, insertions, and frameshifts too. So it's directly "future" proof.