replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data
https://case-group.github.io/
GNU General Public License v3.0
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Feature: add nextclades pango assigment #261

Closed MarieLataretu closed 8 months ago

MarieLataretu commented 8 months ago

added Nextclade's pangolin assigment to datatables

replikation commented 8 months ago

is the data table extracted from nextclade output or from pangolin?

MarieLataretu commented 8 months ago

It's Nextclade output!

The column contains the Pangolin assignment of Nextclade, see here (on the bottom between the last two blue boxes)