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replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data
https://case-group.github.io/
GNU General Public License v3.0
40 stars 17 forks source link

Update guppy #33

Closed hoelzer closed 3 years ago

hoelzer commented 3 years ago

Should we update Guppy GPU and CPU with the next PR?

4.4.1-1--a3fcea3

replikation commented 3 years ago

could break things so i was avoiding that for now as the minimum cuda version is 11 for the new guppy, what do you have on your system?

hoelzer commented 3 years ago

Don't know how to check the version. I tried a couple of things but nothing gave me the version. 

nvcc --version
nvidia-smi

are not installed to get the version.

We just installed NVIDIA driver version 460.

And yeah, of course if it runs stable that's fine. I just saw that there is a newer version.

replikation commented 3 years ago
hoelzer commented 3 years ago

thx but nope, no /usr/local/cuda folder on that machine