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poreCov
SARS-CoV-2 workflow for nanopore sequence data
https://case-group.github.io/
GNU General Public License v3.0
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Multithreaded bwa mem
#57
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RaverJay
closed
3 years ago
RaverJay
commented
3 years ago
add -t ${task.cpus} to bwa mem call
is much faster now obviously
should think about replacing bwa mem with minimap2 anyway
replikation
commented
3 years ago
yep thanks i merge looks good
should think about replacing bwa mem with minimap2 anyway