more verbose error messages if the sample input is faulty or wrong

replikation / poreCov

SARS-CoV-2 workflow for nanopore sequence data

https://case-group.github.io/

GNU General Public License v3.0

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Closed replikation closed 3 years ago

replikation commented 3 years ago

a better input validation would be gread to validate the input csv
current observation is that users are confused as the workflow is not explicitly stating if something is wrong with their input
solutions might be some groovy syntax to validate the file first before the channel magic happens?