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rformassspectrometry
/
MsBackendMassbank
A prototype backend to parse MassBank records into Spectra
https://rformassspectrometry.github.io/MsBackendMassbank/
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feat: add extractByIndex method
#51
jorainer
closed
1 week ago
0
Fix issue #49
#50
jorainer
closed
11 months ago
1
Extra empty line at the end of the exported file
#49
ksjewell
opened
11 months ago
2
Changing backend
#48
ksjewell
opened
1 year ago
3
feat: add backendBpparam for MsBackendMassbankSql
#47
jorainer
closed
1 year ago
0
added support for EAD parameters
#46
michaelwitting
closed
1 year ago
2
Add subtags for EAD fragmentation mode
#45
michaelwitting
opened
1 year ago
0
fix: skip export of retention time if missing
#44
jorainer
closed
1 year ago
0
Validate MsBackendMassbankSql using the full Spectra MsBackend test suite
#43
jorainer
closed
1 year ago
0
Issue with extracting data from MassBank -- follow-up to #37
#42
eterlova
closed
2 years ago
7
Michael comment
#41
michaelwitting
closed
2 years ago
0
Jomain
#40
jorainer
closed
2 years ago
0
Ms backend cached
#39
jorainer
closed
2 years ago
0
Reverse or foward score for compareSpectra
#38
MonicaCalSan
closed
2 years ago
2
How to load Massbank.sql
#37
MonicaCalSan
closed
2 years ago
2
Error when installing the package
#36
MonicaCalSan
closed
2 years ago
2
Fix wrong column name for collision energy
#35
jorainer
closed
2 years ago
0
docs: add Michele as contributor
#34
jorainer
closed
3 years ago
0
docs: add logo.png and update CI
#33
jorainer
closed
3 years ago
0
Cache `precursorMz` values for faster candidate lookup
#32
meowcat
closed
3 years ago
4
fix: fix selectSpectraVariables with a single variable in localData
#31
jorainer
closed
3 years ago
0
Add spectraVariableMapping
#30
michaelwitting
closed
1 year ago
0
Unit test `selectSpectraVariables` fails if `localData` is present and requested
#29
meowcat
closed
3 years ago
3
database-side filterPrecursorMz
#28
meowcat
opened
3 years ago
20
sticker!
#27
jorainer
closed
3 years ago
7
refactor: add unit tests, fix smaller bugs and reformati
#26
jorainer
closed
3 years ago
0
Bioc submission
#25
jorainer
closed
3 years ago
3
Include compound annotations in spectraData
#24
jorainer
closed
3 years ago
2
compounds vs spectraData?
#23
meowcat
closed
3 years ago
7
Change compound table from "compound" to "ms_compound"
#22
jorainer
closed
3 years ago
0
Add ion mobility fields
#21
michaelwitting
closed
3 years ago
0
Devel michael
#20
michaelwitting
closed
3 years ago
0
update devel branch
#19
michaelwitting
closed
3 years ago
0
Devel michael
#18
michaelwitting
closed
3 years ago
0
Add MsBackendMassbankSql backend
#17
jorainer
closed
3 years ago
3
Devel michael
#16
michaelwitting
closed
4 years ago
0
Update with master
#15
michaelwitting
closed
4 years ago
0
Switch to BioC github action
#14
jorainer
closed
4 years ago
1
refactor: adapt the package to recent changes in Spectra
#13
michaelwitting
closed
4 years ago
0
Devel michael
#12
michaelwitting
closed
4 years ago
0
updated standard behavior to read several fields as standard, issue #7
#11
michaelwitting
closed
4 years ago
0
Differentiation of RT
#10
michaelwitting
opened
4 years ago
0
updated reading function and unit test, solves #8
#9
michaelwitting
closed
4 years ago
0
Fix when missing rtime
#8
michaelwitting
closed
4 years ago
3
Default for metadata
#7
michaelwitting
closed
4 years ago
3
Devel michael
#6
michaelwitting
closed
4 years ago
1
example with metadata
#5
michaelwitting
closed
4 years ago
0
Devel michael
#4
michaelwitting
closed
4 years ago
0
Add functions for MSnbase Spectra
#3
michaelwitting
closed
4 years ago
0
Add function to isolate peak annotation
#2
michaelwitting
opened
4 years ago
1
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