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rformassspectrometry / MsBackendSql

MsBackend adding support to store/access mass spectrometry data in large SQL databases through the Spectra R package.
https://rformassspectrometry.github.io/MsBackendSql/
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SQL backend supporting parallel processing #9

Closed jorainer closed 1 year ago

jorainer commented 1 year ago

Issue with parallel processing with the current MsBackendSql is that it is not possible to use the same database connection across different parallel processes. A backend that opens and closes the connection for each query might however support that.

jorainer commented 1 year ago

Currently working on a MsBackendOfflineSql that opens/closes the database connection.

jorainer commented 1 year ago

ping @meowcat

jorainer commented 1 year ago

Closing this issue, since the offline backend should support parallel processing.