Closed meowcat closed 3 years ago
Can you please provide the output of your sessionInfo
?
Oh man. I fixed it now. Thanks so much @meowcat for reporting and the reproducible example!
The problem was that the list
returned by peaksData,MsBackendMassbankSql
is named. And the name is then used as the variable name. Anyway, I dropped now the names and it works. I will merge then change into the master branch once the unit tests run through.
Can you please verify that it's working now @meowcat and eventually close the issue?
Works, thanks!
Hi,
filing this here, perhaps it's a MsBackendMassbankSql issue. Using
addProcessing
with the "new".peaksapply
, fails for me on aMsBackendMassbankSql
backend at time of applying a lazy queue.Error in (function (x, ...) : argument "x" is missing, with no default
It works if I convert the data to
MsBackendDataFrame
first. Everything worked with the old.peaksapply
where argumentsms2Level
andcentroided
were expected.I can't get far in debugging because the error handler obscures to me where the issue actually is coming from.
Below is a reprex with the
minimassbank.sqlite
: