Which file is the sample.cnv.txt file used by plot_cnv.sh script?

rgcgithub / clamms

CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.

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Which file is the sample.cnv.txt file used by plot_cnv.sh script? #19

Open lakhujanivijay opened 5 years ago

lakhujanivijay commented 5 years ago

I am looking at this for plotting the CNV results and I am wondering what is this file - sample.cnv.txt ; is this the sample.cnv.bed file which is the output from $CLAMMS_DIR/call_cnv program?

Please help.