Mamba error creating Rosella env

[AroneyS]

Got error creating Rosella env (see below). Incompatible versions?

I noticed that it has the defaults channel, but removing that doesn't fix it (see https://mamba.readthedocs.io/en/latest/user_guide/troubleshooting.html#mixing-the-defaults-and-conda-forge-channels). Any ideas?

```bash Creating conda environment /work/microbiome/abisko/aroneys/envs/ddcae33115cf8b2c3bdd8d79b3abbe7e_/lib/python3.11/site-packages/aviary/modules/binning/envs/rosella.yaml... Downloading and installing remote packages. CreateCondaEnvironmentException: Could not create conda environment from /work/microbiome/abisko/aroneys/envs/ddcae33115cf8b2c3bdd8d79b3abbe7e_/lib/python3.11/site-packages/aviary/modules/binning/envs/rosella.yaml: Command: mamba env create --quiet --file "/work/microbiome/abisko/aroneys/envs/9c0f1c514d27a6713bf925f7bd327aeb_.yaml" --prefix "/work/microbiome/abisko/aroneys/envs/9c0f1c514d27a6713bf925f7bd327aeb_" Output: warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY .... [repeats a bunch of times] ... warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY Could not solve for environment specs The following packages are incompatible ├─ checkm-genome 1.1.3 is installable with the potential options │ ├─ checkm-genome 1.1.3 would require │ │ └─ pysam >=0.12.0.1 with the potential options │ │ ├─ pysam [0.15.1|0.15.2|0.15.3] would require │ │ │ └─ libdeflate >=1.0,<1.1.0a0 , which conflicts with any installable versions previously reported; │ │ ├─ pysam [0.12.0.1|0.13.0|...|0.15.4] would require │ │ │ └─ python [2.7* |>=2.7,<2.8.0a0 ], which can be installed; │ │ ├─ pysam [0.14.1|0.15.0|...|0.15.4] would require │ │ │ └─ python >=3.6,<3.7.0a0 , which can be installed; │ │ ├─ pysam [0.15.2|0.15.3|0.15.4] would require │ │ │ └─ python >=3.7,<3.8.0a0 , which can be installed; │ │ ├─ pysam [0.15.2|0.15.4|...|0.21.0] would require │ │ │ └─ python_abi 3.6.* *_cp36m, which can be installed; │ │ ├─ pysam [0.15.2|0.15.4|...|0.21.0] would require │ │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ │ ├─ pysam [0.15.2|0.16.0.1|...|0.20.0] would require │ │ │ └─ python_abi 2.7.* *_cp27mu, which can be installed; │ │ ├─ pysam [0.15.2|0.16.0.1|...|0.22.0] would require │ │ │ └─ python_abi 3.8.* *_cp38, which can be installed; │ │ ├─ pysam 0.16.0.1 would require │ │ │ ├─ openssl >=1.1.1k,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam [0.17.0|0.18.0] would require │ │ │ ├─ openssl >=1.1.1l,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam [0.17.0|0.18.0] would require │ │ │ ├─ libdeflate >=1.9,<1.10.0a0 , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam 0.19.0 would require │ │ │ ├─ openssl >=1.1.1n,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam 0.19.1 would require │ │ │ └─ openssl >=1.1.1q,<1.1.2a , which can be installed; │ │ ├─ pysam 0.19.1 would require │ │ │ ├─ openssl >=1.1.1o,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam 0.19.1 would require │ │ │ ├─ openssl >=1.1.1q,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam 0.20.0 would require │ │ │ └─ openssl >=1.1.1s,<1.1.2a , which can be installed; │ │ ├─ pysam 0.20.0 would require │ │ │ ├─ openssl >=1.1.1s,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam [0.21.0|0.22.0] would require │ │ │ └─ libdeflate >=1.18,<1.19.0a0 , which can be installed; │ │ ├─ pysam 0.21.0 would require │ │ │ └─ openssl >=1.1.1t,<1.1.2a , which can be installed; │ │ ├─ pysam 0.21.0 would require │ │ │ ├─ openssl >=1.1.1t,<1.1.2a , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam [0.21.0|0.22.0] would require │ │ │ ├─ libdeflate >=1.18,<1.19.0a0 , which can be installed; │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ ├─ pysam [0.12.0.1|0.13.0|...|0.15.0.1] would require │ │ │ └─ python [3.5* |>=3.5,<3.6.0a0 ], which can be installed; │ │ └─ pysam [0.12.0.1|0.13.0|0.14.0|0.14.1] would require │ │ └─ python 3.6* , which can be installed; │ └─ checkm-genome 1.1.3 would require │ └─ pysam >=0.15.3 with the potential options │ ├─ pysam [0.15.1|0.15.2|0.15.3], which cannot be installed (as previously explained); │ ├─ pysam [0.12.0.1|0.13.0|...|0.15.4], which can be installed (as previously explained); │ ├─ pysam [0.14.1|0.15.0|...|0.15.4], which can be installed (as previously explained); │ ├─ pysam [0.15.2|0.15.3|0.15.4], which can be installed (as previously explained); │ ├─ pysam [0.15.2|0.15.4|...|0.21.0], which can be installed (as previously explained); │ ├─ pysam [0.15.2|0.15.4|...|0.21.0], which can be installed (as previously explained); │ ├─ pysam [0.15.2|0.16.0.1|...|0.20.0], which can be installed (as previously explained); │ ├─ pysam [0.15.2|0.16.0.1|...|0.22.0], which can be installed (as previously explained); │ ├─ pysam 0.16.0.1, which can be installed (as previously explained); │ ├─ pysam [0.17.0|0.18.0], which can be installed (as previously explained); │ ├─ pysam [0.17.0|0.18.0], which can be installed (as previously explained); │ ├─ pysam 0.19.0, which can be installed (as previously explained); │ ├─ pysam 0.19.1, which can be installed (as previously explained); │ ├─ pysam 0.19.1, which can be installed (as previously explained); │ ├─ pysam 0.19.1, which can be installed (as previously explained); │ ├─ pysam 0.20.0, which can be installed (as previously explained); │ ├─ pysam 0.20.0, which can be installed (as previously explained); │ ├─ pysam [0.21.0|0.22.0], which can be installed (as previously explained); │ ├─ pysam 0.21.0, which can be installed (as previously explained); │ ├─ pysam 0.21.0, which can be installed (as previously explained); │ └─ pysam [0.21.0|0.22.0], which can be installed (as previously explained); ├─ matplotlib is installable with the potential options │ ├─ matplotlib [3.8.0|3.8.1|3.8.2] would require │ │ ├─ pyqt >=5.10 with the potential options │ │ │ ├─ pyqt [5.12.3|5.15.4|5.15.7] would require │ │ │ │ ├─ pyqtwebengine 5.12.1 py37he336c9b_5, which requires │ │ │ │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ │ │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ └─ python >=2.7,<2.8.0a0 , which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ ├─ pyqt-impl 5.12.3 py310h1f8e252_8, which requires │ │ │ │ │ └─ qt >=5.12.9,<5.13.0a0 with the potential options │ │ │ │ │ ├─ qt 5.12.9 would require │ │ │ │ │ │ └─ openssl <3 , which can be installed; │ │ │ │ │ ├─ qt 5.12.9 would require │ │ │ │ │ │ ├─ icu >=67.1,<68.0a0 , which can be installed; │ │ │ │ │ │ └─ openssl >=1.1.1g,<1.1.2a , which can be installed; │ │ │ │ │ ├─ qt 5.12.9 would require │ │ │ │ │ │ ├─ icu >=67.1,<68.0a0 , which can be installed; │ │ │ │ │ │ └─ openssl >=1.1.1i,<1.1.2a , which can be installed; │ │ │ │ │ ├─ qt 5.12.9 would require │ │ │ │ │ │ └─ openssl >=1.1.1i,<1.1.2a , which can be installed; │ │ │ │ │ └─ qt 5.12.9 would require │ │ │ │ │ └─ openssl >=1.1.1j,<1.1.2a , which can be installed; │ │ │ │ ├─ pyqtwebengine 5.12.1 py310hfcd6d55_8, which requires │ │ │ │ │ └─ qt >=5.12.9,<5.13.0a0 , which can be installed (as previously explained); │ │ │ │ └─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ └─ python_abi 3.6.* *_cp36m, which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ └─ python >=3.6,<3.7.0a0 , which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ └─ python >=3.7,<3.8.0a0 , which can be installed; │ │ │ ├─ pyqt [5.12.3|5.15.4|5.15.7|5.15.9] would require │ │ │ │ └─ python_abi 3.8.* *_cp38, which can be installed; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ └─ python >=3.8,<3.9.0a0 with the potential options │ │ │ │ ├─ python [3.8.0|3.8.1|...|3.8.8], which can be installed; │ │ │ │ ├─ python [3.8.0|3.8.1] would require │ │ │ │ │ └─ python_abi * *_cp38, which conflicts with any installable versions previously reported; │ │ │ │ └─ python [3.8.10|3.8.12|...|3.8.8] would require │ │ │ │ └─ python_abi 3.8.* *_cp38, which conflicts with any installable versions previously reported; │ │ │ ├─ pyqt 5.12.3 would require │ │ │ │ ├─ pyqtwebengine [5.12.1 py39h0fcd23e_6|5.12.1 py39h0fcd23e_7|5.12.1 py39h0fcd23e_8], which can be installed (as previously explained); │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt >=5.12.9,<5.13.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.4 would require │ │ │ │ ├─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ └─ qt-main >=5.15.3,<5.16.0a0 with the potential options │ │ │ │ ├─ qt-main 5.15.6 would require │ │ │ │ │ └─ openssl >=1.1.1q,<1.1.2a , which can be installed; │ │ │ │ ├─ qt-main 5.15.6 would require │ │ │ │ │ └─ openssl >=1.1.1s,<1.1.2a , which can be installed; │ │ │ │ ├─ qt-main [5.15.6|5.15.8] would require │ │ │ │ │ └─ libpq >=15.1,<16.0a0 with the potential options │ │ │ │ │ ├─ libpq 15.4 would require │ │ │ │ │ │ └─ openssl >=3.2.0,<3.2.0a0 , which does not exist (perhaps a missing channel); │ │ │ │ │ ├─ libpq 15.4 would require │ │ │ │ │ │ └─ openssl >=3.1.2,<3.2.0a0 , which can be installed; │ │ │ │ │ ├─ libpq 15.4 would require │ │ │ │ │ │ └─ openssl >=3.1.3,<3.2.0a0 , which can be installed; │ │ │ │ │ ├─ libpq 15.1 would require │ │ │ │ │ │ └─ openssl >=1.1.1s,<1.1.2a , which can be installed; │ │ │ │ │ ├─ libpq 15.1 would require │ │ │ │ │ │ └─ openssl >=3.0.7,<3.2.0a0 , which can be installed; │ │ │ │ │ ├─ libpq 15.2 would require │ │ │ │ │ │ └─ openssl >=3.0.8,<3.2.0a0 , which can be installed; │ │ │ │ │ ├─ libpq 15.3 would require │ │ │ │ │ │ └─ openssl >=3.1.0,<3.2.0a0 , which can be installed; │ │ │ │ │ └─ libpq 15.3 would require │ │ │ │ │ └─ openssl >=3.1.1,<3.2.0a0 , which can be installed; │ │ │ │ ├─ qt-main 5.15.8 would require │ │ │ │ │ └─ libpq >=15.3,<16.0a0 with the potential options │ │ │ │ │ ├─ libpq 15.4, which cannot be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.3, which can be installed (as previously explained); │ │ │ │ │ └─ libpq 15.3, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8 would require │ │ │ │ │ └─ libjpeg-turbo >=3.0.0,<4.0a0 , which can be installed; │ │ │ │ ├─ qt-main 5.15.8 would require │ │ │ │ │ └─ libpq >=15.2,<16.0a0 with the potential options │ │ │ │ │ ├─ libpq 15.4, which cannot be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.2, which can be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.3, which can be installed (as previously explained); │ │ │ │ │ └─ libpq 15.3, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8 would require │ │ │ │ │ └─ libpq >=15.4,<16.0a0 with the potential options │ │ │ │ │ ├─ libpq 15.4, which cannot be installed (as previously explained); │ │ │ │ │ ├─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ │ └─ libpq 15.4, which can be installed (as previously explained); │ │ │ │ ├─ qt-main [5.15.3|5.15.4] would require │ │ │ │ │ └─ openssl >=1.1.1o,<1.1.2a , which can be installed; │ │ │ │ └─ qt-main 5.15.3 would require │ │ │ │ └─ openssl >=1.1.1n,<1.1.2a , which can be installed; │ │ │ ├─ pyqt 5.15.4 would require │ │ │ │ ├─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ └─ qt-main >=5.15.2,<5.16.0a0 with the potential options │ │ │ │ ├─ qt-main 5.15.6, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.6, which can be installed (as previously explained); │ │ │ │ ├─ qt-main [5.15.6|5.15.8], which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main [5.15.3|5.15.4], which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.3, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.2 would require │ │ │ │ │ └─ openssl >=1.1.1l,<1.1.2a , which can be installed; │ │ │ │ └─ qt-main 5.15.2 conflicts with any installable versions previously reported; │ │ │ ├─ pyqt 5.15.4 would require │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt-main >=5.15.3,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.4 would require │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt-main >=5.15.2,<5.16.0a0 with the potential options │ │ │ │ ├─ qt-main 5.15.6, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.6, which can be installed (as previously explained); │ │ │ │ ├─ qt-main [5.15.6|5.15.8], which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.8, which can be installed (as previously explained); │ │ │ │ ├─ qt-main [5.15.3|5.15.4], which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.3, which can be installed (as previously explained); │ │ │ │ ├─ qt-main 5.15.2, which can be installed (as previously explained); │ │ │ │ └─ qt-main 5.15.2 conflicts with any installable versions previously reported; │ │ │ ├─ pyqt 5.15.7 would require │ │ │ │ ├─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ └─ qt-main >=5.15.4,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.7 would require │ │ │ │ ├─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ └─ qt-main >=5.15.6,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt [5.15.7|5.15.9] would require │ │ │ │ └─ python_abi 3.11.* *_cp311, which can be installed; │ │ │ ├─ pyqt 5.15.7 would require │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt-main >=5.15.4,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.7 would require │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt-main >=5.15.6,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.9 would require │ │ │ │ ├─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ └─ qt-main >=5.15.8,<5.16.0a0 , which can be installed (as previously explained); │ │ │ ├─ pyqt 5.15.9 would require │ │ │ │ └─ python_abi 3.12.* *_cp312, which can be installed; │ │ │ ├─ pyqt 5.15.9 would require │ │ │ │ ├─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ └─ qt-main >=5.15.8,<5.16.0a0 , which can be installed (as previously explained); │ │ │ └─ pyqt [5.15.10|5.15.7] conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [1.5.3|2.1.2|2.2.3|2.2.4] would require │ │ └─ python [2.7* |>=2.7,<2.8.0a0 ], which can be installed; │ ├─ matplotlib 1.5.3 would require │ │ └─ python 3.4* , which can be installed; │ ├─ matplotlib 1.5.3 would require │ │ └─ python 3.5* , which can be installed; │ ├─ matplotlib [2.1.2|2.2.3|...|3.1.3] would require │ │ └─ python >=3.6,<3.7.0a0 , which can be installed; │ ├─ matplotlib [2.1.2|2.2.3|...|3.1.3] would require │ │ └─ python >=3.7,<3.8.0a0 , which can be installed; │ ├─ matplotlib [2.2.4|3.1.1|3.1.2|3.1.3] would require │ │ └─ python >=3.8,<3.9.0a0 with the potential options │ │ ├─ python [3.8.0|3.8.1|...|3.8.8], which can be installed; │ │ ├─ python [3.8.0|3.8.1], which cannot be installed (as previously explained); │ │ └─ python [3.8.10|3.8.12|...|3.8.8], which cannot be installed (as previously explained); │ ├─ matplotlib 2.2.5 would require │ │ └─ matplotlib-base >=2.2.5,<2.2.6.0a0 with the potential options │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3] would require │ │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ │ ├─ matplotlib-base 2.2.5 would require │ │ │ └─ python_abi 2.7.* *_cp27mu, which can be installed; │ │ ├─ matplotlib-base [2.2.5|3.2.2] would require │ │ │ └─ icu >=67.1,<68.0a0 , which can be installed; │ │ └─ matplotlib-base [2.2.5|3.2.1|...|3.3.4] would require │ │ └─ python_abi 3.6.* *_cp36m, which can be installed; │ ├─ matplotlib 3.0.1 would require │ │ └─ matplotlib-base 3.0.1 py37hc2fb212_1001, which does not exist (perhaps a missing channel); │ ├─ matplotlib 3.0.2 would require │ │ └─ matplotlib-base 3.0.2 py36h167e16e_1000, which does not exist (perhaps a missing channel); │ ├─ matplotlib 3.0.2 would require │ │ └─ matplotlib-base 3.0.2 py36h167e16e_1001, which does not exist (perhaps a missing channel); │ ├─ matplotlib 3.0.2 would require │ │ └─ matplotlib-base 3.0.2 py37h167e16e_1001, which does not exist (perhaps a missing channel); │ ├─ matplotlib 3.2.0 would require │ │ └─ matplotlib-base >=3.2.0,<3.2.1.0a0 with the potential options │ │ ├─ matplotlib-base 3.2.0 would require │ │ │ └─ python >=3.6,<3.7.0a0 , which can be installed; │ │ ├─ matplotlib-base 3.2.0 would require │ │ │ └─ python >=3.7,<3.8.0a0 , which can be installed; │ │ └─ matplotlib-base 3.2.0 would require │ │ └─ python >=3.8,<3.9.0a0 with the potential options │ │ ├─ python [3.8.0|3.8.1|...|3.8.8], which can be installed; │ │ ├─ python [3.8.0|3.8.1], which cannot be installed (as previously explained); │ │ └─ python [3.8.10|3.8.12|...|3.8.8], which cannot be installed (as previously explained); │ ├─ matplotlib 3.2.1 would require │ │ └─ matplotlib-base >=3.2.1,<3.2.2.0a0 with the potential options │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3] would require │ │ │ └─ python_abi 3.8.* *_cp38, which can be installed; │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ └─ matplotlib-base 3.2.1 conflicts with any installable versions previously reported; │ ├─ matplotlib 3.2.2 would require │ │ └─ matplotlib-base >=3.2.2,<3.2.3.0a0 with the potential options │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.2], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ ├─ matplotlib-base [3.2.2|3.3.0|...|3.3.4] would require │ │ │ └─ python_abi 3.6 *_pypy36_pp73, which can be installed; │ │ └─ matplotlib-base 3.2.2 conflicts with any installable versions previously reported; │ ├─ matplotlib 3.3.0 would require │ │ └─ matplotlib-base >=3.3.0,<3.3.1.0a0 , which can be installed (as previously explained); │ ├─ matplotlib 3.3.1 would require │ │ └─ matplotlib-base >=3.3.1,<3.3.2.0a0 with the potential options │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ ├─ matplotlib-base [3.2.2|3.3.0|...|3.3.4], which can be installed (as previously explained); │ │ └─ matplotlib-base 3.3.1 conflicts with any installable versions previously reported; │ ├─ matplotlib 3.3.2 would require │ │ ├─ matplotlib-base >=3.3.2,<3.3.3.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3] would require │ │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.2|3.3.0|...|3.3.4], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.3.2 conflicts with any installable versions previously reported; │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ ├─ matplotlib [3.3.2|3.3.3|3.3.4] would require │ │ └─ python_abi 3.6.* *_cp36m, which can be installed; │ ├─ matplotlib [3.3.2|3.3.3|3.3.4] would require │ │ └─ python_abi 3.6 *_pypy36_pp73, which can be installed; │ ├─ matplotlib [3.3.2|3.3.3|...|3.5.3] would require │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ ├─ matplotlib [3.3.2|3.3.3|...|3.7.3] would require │ │ └─ python_abi 3.8.* *_cp38, which can be installed; │ ├─ matplotlib [3.3.3|3.3.4|...|3.5.2] would require │ │ └─ python_abi 3.7 *_pypy37_pp73, which can be installed; │ ├─ matplotlib 3.3.3 would require │ │ ├─ matplotlib-base >=3.3.3,<3.3.4.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2] would require │ │ │ │ └─ python_abi 3.7 *_pypy37_pp73, which can be installed; │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.2|3.3.0|...|3.3.4], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.3.3, which can be installed; │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ ├─ matplotlib 3.3.4 would require │ │ ├─ matplotlib-base >=3.3.4,<3.3.5.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.3.4], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.2|3.3.0|...|3.3.4], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.3.4, which can be installed; │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ ├─ matplotlib 3.4.1 would require │ │ ├─ matplotlib-base >=3.4.1,<3.4.2.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.4.1, which can be installed; │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ ├─ matplotlib 3.4.2 would require │ │ ├─ matplotlib-base >=3.4.2,<3.4.3.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.4.2, which can be installed; │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ ├─ matplotlib 3.4.3 would require │ │ ├─ matplotlib-base >=3.4.3,<3.4.4.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3] would require │ │ │ │ └─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.4.3 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.5.0 would require │ │ ├─ matplotlib-base >=3.5.0,<3.5.1.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.5.0 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.5.1 would require │ │ ├─ matplotlib-base >=3.5.1,<3.5.2.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.5.1 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.5.2 would require │ │ ├─ matplotlib-base >=3.5.2,<3.5.3.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3] would require │ │ │ │ └─ python_abi 3.8 *_pypy38_pp73, which can be installed; │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3] would require │ │ │ │ └─ python_abi 3.9 *_pypy39_pp73, which conflicts with any installable versions previously reported; │ │ │ ├─ matplotlib-base [3.3.3|3.3.4|...|3.5.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.5.2 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [3.5.2|3.5.3|...|3.6.3] would require │ │ └─ python_abi 3.8 *_pypy38_pp73, which can be installed; │ ├─ matplotlib [3.5.2|3.5.3|...|3.6.3] would require │ │ └─ python_abi 3.9 *_pypy39_pp73, which conflicts with any installable versions previously reported; │ ├─ matplotlib 3.5.3 would require │ │ ├─ matplotlib-base >=3.5.3,<3.5.4.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which cannot be installed (as previously explained); │ │ │ ├─ matplotlib-base [2.2.5|3.2.1|...|3.5.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.5.3 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.6.0 would require │ │ ├─ matplotlib-base >=3.6.0,<3.6.1.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which cannot be installed (as previously explained); │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [3.6.1|3.6.3] would require │ │ ├─ matplotlib-base [>=3.6.1,<3.6.2.0a0 |>=3.6.3,<3.6.4.0a0 ] with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3] would require │ │ │ │ └─ python_abi 3.11.* *_cp311, which can be installed; │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which can be installed (as previously explained); │ │ │ └─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which cannot be installed (as previously explained); │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [3.6.1|3.6.2|...|3.8.2] would require │ │ └─ python_abi 3.11.* *_cp311, which can be installed; │ ├─ matplotlib 3.6.2 would require │ │ ├─ matplotlib-base >=3.6.2,<3.6.3.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.5.2|3.5.3|...|3.6.3], which cannot be installed (as previously explained); │ │ │ └─ matplotlib-base 3.6.2 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.7.0 would require │ │ ├─ matplotlib-base >=3.7.0,<3.7.1.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2] would require │ │ │ │ └─ pypy3.8 >=7.3.11 , which can be installed; │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2] would require │ │ │ │ └─ pypy3.9 >=7.3.11 , which can be installed; │ │ │ └─ matplotlib-base 3.7.0 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [3.7.0|3.7.1|3.7.2] would require │ │ └─ pypy3.8 >=7.3.11 , which can be installed; │ ├─ matplotlib [3.7.0|3.7.1|3.7.2] would require │ │ └─ pypy3.9 >=7.3.11 , which can be installed; │ ├─ matplotlib 3.7.1 would require │ │ ├─ matplotlib-base >=3.7.1,<3.7.2.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.7.1 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.7.2 would require │ │ ├─ matplotlib-base >=3.7.2,<3.7.3.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.7.0|3.7.1|3.7.2], which can be installed (as previously explained); │ │ │ └─ matplotlib-base 3.7.2 conflicts with any installable versions previously reported; │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib 3.7.3 would require │ │ ├─ matplotlib-base >=3.7.3,<3.7.4.0a0 with the potential options │ │ │ ├─ matplotlib-base [3.4.3|3.5.0|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.6.1|3.6.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base [3.2.1|3.2.2|...|3.7.3], which can be installed (as previously explained); │ │ │ ├─ matplotlib-base 3.7.3 would require │ │ │ │ └─ pypy3.9 >=7.3.12 , which can be installed; │ │ │ └─ matplotlib-base [3.3.2|3.4.3|...|3.7.3], which can be installed (as previously explained); │ │ └─ python_abi [3.10.* *_cp310|3.9.* *_cp39], which can be installed; │ ├─ matplotlib [3.7.3|3.8.0] would require │ │ └─ pypy3.9 >=7.3.12 , which can be installed; │ ├─ matplotlib 3.8.0 would require │ │ ├─ matplotlib-base >=3.8.0,<3.8.1.0a0 with the potential options │ │ │ ├─ matplotlib-base 3.8.0 would require │ │ │ │ ├─ pillow >=6.2.0 with the potential options │ │ │ │ │ ├─ pillow [6.2.2|7.0.0|...|8.3.2] would require │ │ │ │ │ │ └─ python_abi 3.6.* *_cp36m, which can be installed; │ │ │ │ │ ├─ pillow [6.2.2|7.0.0|...|9.2.0] would require │ │ │ │ │ │ └─ python_abi 3.7.* *_cp37m, which can be installed; │ │ │ │ │ ├─ pillow [8.1.0|8.1.1|...|9.1.0] would require │ │ │ │ │ │ └─ python_abi 3.7 *_pypy37_pp73, which can be installed; │ │ │ │ │ ├─ pillow [10.0.0|10.0.1|...|9.5.0] would require │ │ │ │ │ │ └─ python_abi 3.8.* *_cp38, which can be installed; │ │ │ │ │ ├─ pillow [8.3.2|8.4.0|...|9.1.1] would require │ │ │ │ │ │ ├─ libtiff >=4.3.0,<4.4.0a0 but there are no viable options │ │ │ │ │ │ │ ├─ libtiff [4.3.0|4.4.0] would require │ │ │ │ │ │ │ │ └─ libdeflate >=1.10,<1.11.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ │ ├─ libtiff 4.3.0 would require │ │ │ │ │ │ │ │ └─ libdeflate >=1.8,<1.9.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ │ └─ libtiff 4.3.0 would require │ │ │ │ │ │ │ └─ libdeflate >=1.7,<1.8.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ └─ python_abi 3.9.* *_cp39, which can be installed; │ │ │ │ │ ├─ pillow [8.4.0|9.0.0|9.0.1|9.1.0|9.1.1] would require │ │ │ │ │ │ ├─ libtiff >=4.3.0,<4.4.0a0 , which cannot be installed (as previously explained); │ │ │ │ │ │ └─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ │ ├─ pillow [9.1.0|9.1.1|9.2.0|9.4.0] would require │ │ │ │ │ │ └─ python_abi 3.8 *_pypy38_pp73, which can be installed; │ │ │ │ │ ├─ pillow [9.1.0|9.1.1|9.2.0|9.4.0] would require │ │ │ │ │ │ └─ python_abi 3.9 *_pypy39_pp73, which conflicts with any installable versions previously reported; │ │ │ │ │ ├─ pillow 9.1.1 would require │ │ │ │ │ │ ├─ libtiff >=4.3.0,<4.5.0a0 but there are no viable options │ │ │ │ │ │ │ ├─ libtiff [4.4.0|4.5.0] would require │ │ │ │ │ │ │ │ └─ libdeflate >=1.14,<1.15.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ │ ├─ libtiff [4.3.0|4.4.0], which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.3.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.3.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.4.0 would require │ │ │ │ │ │ │ │ └─ libdeflate >=1.12,<1.13.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ │ ├─ libtiff 4.4.0 would require │ │ │ │ │ │ │ │ └─ libdeflate >=1.13,<1.14.0a0 , which conflicts with any installable versions previously reported; │ │ │ │ │ │ │ └─ libtiff 4.4.0 conflicts with any installable versions previously reported; │ │ │ │ │ │ └─ python_abi 3.10.* *_cp310, which can be installed; │ │ │ │ │ ├─ pillow 9.1.1 would require │ │ │ │ │ │ ├─ libtiff >=4.3.0,<4.5.0a0 but there are no viable options │ │ │ │ │ │ │ ├─ libtiff [4.4.0|4.5.0], which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff [4.3.0|4.4.0], which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.3.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.3.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.4.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ ├─ libtiff 4.4.0, which cannot be installed (as previously explained); │ │ │ │ │ │ │ └─ libtiff 4.4.0 conflicts with any installable versions previously reported; ... [had to truncate due to too many characters] ... │ ├─ python [3.8.0|3.8.1], which cannot be installed (as previously explained); │ └─ python [3.8.10|3.8.12|...|3.8.8], which cannot be installed (as previously explained); ├─ umap-learn [0.5.3|0.5.4|0.5.5] would require │ └─ python_abi 3.9.* *_cp39, which can be installed; ├─ umap-learn [0.5.3|0.5.4|0.5.5] would require │ └─ python >=3.11,<3.12.0a0 , which conflicts with any installable versions previously reported; └─ umap-learn [0.5.3|0.5.4] conflicts with any installable versions previously reported. ```

[AroneyS]

Might be a problem with my mamba installation? https://github.com/mamba-org/mamba/issues/2533

[AroneyS]

Trying to run mamba manually, I get:

Could not solve for environment specs
Encountered problems while solving:
  - package rosella-0.5.2-h8e1a5b0_0 requires matplotlib-base >=3.8, but none of the providers can be installed

The environment can't be solved, aborting the operation

[AroneyS]

Running with conda instead: Found conflicts! Looking for incompatible packages.

[rhysnewell]

When running manually, are you using the rosella.yaml or just running mamba install rosella?

[AroneyS]

I ran mamba env create --quiet --file "/work/microbiome/abisko/aroneys/envs/9c0f1c514d27a6713bf925f7bd327aeb_.yaml" --prefix "/work/microbiome/abisko/aroneys/envs/9c0f1c514d27a6713bf925f7bd327aeb_" from the error above.

[AroneyS]

Where the yaml is:

channels:
  - conda-forge
  - numba
  - bioconda
dependencies:
  - python >= 3.8, <= 3.10
  - gcc
  - cxx-compiler
  - rosella >= 0.5.2
  - numba >= 0.53, <= 0.57
  - numpy <= 1.24
  - joblib >= 1.1.0, <= 1.3
  - scikit-bio >= 0.5.7
  - umap-learn >= 0.5.3
  - scipy <= 1.11
  - pandas >= 1.3
  - pynndescent >= 0.5.7
  - hdbscan >= 0.8.28
  - scikit-learn >= 1.0.2, <= 1.1
  - flight-genome >= 1.6.1
  - coverm >= 0.6.1
  - seaborn
  - imageio
  - matplotlib
  - tqdm
  - tbb
  - joblib
  - pebble
  - threadpoolctl
  - biopython
  - checkm-genome==1.1.3

[rhysnewell]

I think we can simplify this yaml file now. Can you try creating with this:

channels:
  - conda-forge
  - numba
  - bioconda
dependencies:
  - rosella >= 0.5.2
  - coverm >= 0.6.1
  - checkm-genome==1.1.3

[rhysnewell]

Testing with mamba on my end, it could resolve that environment setup pretty easily. But also my mamba can still resolve the original yaml file, so it might be a configuration issue

[AroneyS]

That seemed to work. Get some ClobberErrors that don't matter?

ClobberError: This transaction has incompatible packages due to a shared path.
  packages: bioconda/linux-64::coverm-0.6.1-h07ea13f_6, bioconda/linux-64::rosella-0.5.2-h8e1a5b0_0
  path: '.crates.toml'

ClobberError: This transaction has incompatible packages due to a shared path.
  packages: bioconda/linux-64::coverm-0.6.1-h07ea13f_6, bioconda/linux-64::rosella-0.5.2-h8e1a5b0_0
  path: '.crates2.json'

[AroneyS]

rosella -h, coverm -h and checkm -h all work fine

[rhysnewell]

You might need to run mamba clean -a, that might get the og yaml file to work as well