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rhysnewell
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rosella
Metagenomic Binning Algorithm
BSD 3-Clause "New" or "Revised" License
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Empty Array During Refinement
#54
schmigle
opened
1 month ago
3
Rosella recover output (bins vs. refined bins)
#53
Rridley7
opened
2 months ago
0
question about the refine module of rosella
#52
quliping
opened
3 months ago
4
New Outputs!
#51
aljazdzy
opened
4 months ago
2
Deadlock fix
#50
rhysnewell
closed
4 months ago
0
error trying to use coverage info from a table
#49
jvollme
opened
5 months ago
3
fix: n_contigs not correctly counting
#48
rhysnewell
closed
6 months ago
0
shapeerror
#47
wwood
closed
6 months ago
7
Usage docs improperly formatted
#46
rhysnewell
opened
7 months ago
0
feat(dev): update coverm engine and docs creations add workflows
#45
rhysnewell
closed
7 months ago
0
v0.5.0
#44
rhysnewell
closed
7 months ago
0
v0.5.0-prerelease
#43
rhysnewell
closed
7 months ago
0
rosella.yml specifies numpy <=1.21 but numba requires numpy >= 1.22
#42
jvollme
closed
7 months ago
2
Error installing flight according to READ.ME
#41
jvollme
closed
7 months ago
3
failed flight process
#40
TJrogers86
closed
7 months ago
7
Generating Coverage Values with Rosella
#39
aljazdzy
closed
10 months ago
17
Rosella Installation dependent on Repository Cloning
#38
ka-block
closed
7 months ago
3
Flight failing when generating combinations of tids: empty tid list due to contig names not matching in assembly and coverage file
#37
gabrieleghiotto
closed
6 months ago
22
Flight error
#36
greenmna
closed
7 months ago
7
Flight error - skbio linked?
#35
willem-stock
closed
1 year ago
7
Flight error.
#34
Valentin-Bio
closed
7 months ago
4
Error when running flight process
#33
mmac0026
closed
7 months ago
6
ERROR coverm::bam_generator] Error when running mapping process.
#32
Valentin-Bio
closed
7 months ago
2
thread 'main' panicked at 'range start index 3 out of range for slice of length 2', library/core/src/slice/index.rs:52:
#31
Jolvii85
closed
7 months ago
12
Rosella recover flight status error
#30
Rridley7
closed
1 year ago
9
package conflicts
#29
janfelix
closed
1 year ago
2
Rosella run questions
#28
Valentin-Bio-zz
closed
7 months ago
10
Compilation problem
#27
dpryan79
closed
1 year ago
5
scikit-bio dependency
#26
jvollme
closed
1 year ago
4
UMAP and HDBSCAN alternatives
#25
jianshu93
opened
1 year ago
7
wiki for rosella refine
#24
Thexiyang
closed
7 months ago
2
annembed for UMAP
#23
jianshu93
closed
1 year ago
1
Feature request: specify binners to exclude in Recover
#22
StevenJRobbins
closed
1 year ago
1
Bioconda installation missing a lot of packages
#21
michoug
closed
1 year ago
2
version: update version to try and bump bioconda build
#20
rhysnewell
closed
2 years ago
0
feat: Adding github release action activated on addition of new versi…
#19
rhysnewell
closed
2 years ago
0
Dev
#18
rhysnewell
closed
2 years ago
0
feat: added refine submodule for further refining bins from any binni…
#17
rhysnewell
closed
2 years ago
0
Dev
#16
rhysnewell
closed
2 years ago
0
Dev
#15
rhysnewell
closed
3 years ago
0
How will metabat based coverage depth and trimmed mean depth will affect binning result
#14
jianshu93
closed
1 year ago
3
Dev
#13
rhysnewell
closed
3 years ago
0
add new logo
#12
rhysnewell
closed
3 years ago
0
Dev
#11
rhysnewell
closed
3 years ago
0
rosella on multiple samples
#10
alienzj
closed
1 year ago
2
Dev
#9
rhysnewell
closed
3 years ago
0
Dev
#8
rhysnewell
closed
3 years ago
0
Update version
#7
rhysnewell
closed
3 years ago
0
updating results plots
#6
rhysnewell
closed
3 years ago
0
Dev
#5
rhysnewell
closed
3 years ago
0
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