Release RiboViz 2.0 - Githubissues

mikej888 commented 4 years ago

Release preparation tickets (labelled R2.0):

Pull requests to be merged into develop branch:

Issues to be completed:

[x] Generalise riboviz.test.regression.test_vignette R2.0 #155 - see PR above
[x] Port Python riboviz.tools.prep_riboviz workflow to Nextflow R2.0 #167 - see PR above
[x] Allow user to configure --output-stats #186
[x] Document recommended memory requirements #192
[x] Document dependency versions #183
[x] Review each item of documentation in develop #185
[x] Explore running RiboViz on Eddie #59
[x] Refactor generate_stats_figs.R R2.0 #32
[ ] Process mouse data for Premal and John R2.0 #96 (optional)
[ ] Prepare Premal's yeast data for use with RiboViz R2.0 #39 (optional)
[ ] Break fork relationship between shahpr/RiboViz and riboviz/RiboViz R2.0 #135 (optional)

Release preparation [1d]

[x] Add Bala, Siyin to Contributors in docs/acks.md.
[x] Merge develop branch into master branch.
[x] Rerun all tests inc. regression tests with Python + Nextflow.
[x] Reserve DOI on Figshare and add a citation to Citing RiboViz in README.md (relates to Deposit RiboViz 2.0 and get a citable DOI R2.0 #173).
[x] Update README.md Releases table.
[x] Tag release in repository.
[x] Build 2.0 DataSync and GitHub data resources.
[x] Deposit RiboViz 2.0 to Figshare.

mikej888 commented 4 years ago

Tiimescale to be discussed at meeting on 10/06/20.

mikej888 commented 4 years ago

riboviz / riboviz