Use full posterior in workflow

[richelbilderbeek]

Now I only store the phylogenies, must also store the parameter estimates.

[richelbilderbeek]

Renamed is_posterior to is_trees_posterior using sed:

sed -i 's/is_posterior/is_trees_posterior/g' *.R

[richelbilderbeek]

Renamed are_identical_posteriors to are_identical_trees_posteriors:

sed -i 's/are_identical_posteriors/are_identical_trees_posteriors/g' *.R

[richelbilderbeek]

Done renaming are_identical_posteriors to are_identical_trees_posteriors with 0f4eecc11f75081dc77c85dd35c0e6aa5c53aaf8

[richelbilderbeek]

After 8a4491f964b40b2e1f570c47ebaf17b4dda80c37 the vignettes need fixing

[richelbilderbeek]

As a stub, I use the lowest ESS value

[richelbilderbeek]

I think I added it, and that it will also work on Peregrine. Let's first check with a small run.

[richelbilderbeek]

Running... :bee:

[richelbilderbeek]

I close this Issue, as it is finished enough to be part of the normal dev process.