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richelbilderbeek / ep_vs_mhcn

Compare the results of EpitopePrediction with those of MHCnuggets
GNU General Public License v3.0
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Using old code gives errors, Travis build passes #1

Open DynCoder opened 3 years ago

DynCoder commented 3 years ago

Why is this happening? Is this supposed to happen?

4091 Error in bbbq::create_random_peptides(n_peptides = n_peptides, n_aas = n_aas) : 
4092   unused argument (n_aas = n_aas)
4093 Calls: <Anonymous> -> expand.grid
4094 Execution halted
4095 Makefile:20: recipe for target 'ep_vs_mhcn.csv' failed
4096 **make:** *** [ep_vs_mhcn.csv] Error 1
richelbilderbeek commented 3 years ago

Looks like I need to update the interface: I have replaced n_aas to protein_length in quite some package, probably need to update that here now.

richelbilderbeek commented 3 years ago

@Joshua260403 I see on Travis that the build passes. Maybe you just need to do a git pull and/or update other packages.

If not, let me know :+1:

richelbilderbeek commented 3 years ago

Seems close to being fixed, thanks to @Joshua260403.

Will close this Issue when he confirms.