Difference between haplotypes in code and in text file?

richelbilderbeek / mhcnuggetsr

Package to call MHCnuggets from R, to predict MHC-I and MHC-II epitopes

GNU General Public License v3.0

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Closed richelbilderbeek closed 4 years ago

richelbilderbeek commented 4 years ago

There are two places where I can find haplotypes in:

AFAICS, they are the same, so for now get_mhc_x_haplotypes simply returns get_trained_mhc_x_haplotypes.

Posted an Issue here to be sure.

richelbilderbeek commented 4 years ago

Yup, these are different :+1: