Process: examples create a distribution of trees of different sizes

[richelbilderbeek]

On Pergrine:

cd data/p230198/pirouette_example_28
zip twin.zip $(find . | egrep newick)

On local:

[download file]
[unzip]

Analyse:

filenames <- list.files(recursive = TRUE)

t <- tibble::tibble(filename = filenames, n_taxa = NA)

for (i in seq_len(nrow(t))) {
  filename <- t$filename[i]
  t$n_taxa[i] <- ape::Ntip(ape::read.tree(filename))
}
t

hist(t$n_taxa)