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richelbilderbeek / razzo

Research project by Giovanni Laudanno and Richel J.C. Bilderbeek
GNU General Public License v3.0
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Do a run with 10 Nested Sampling particles #283

Closed richelbilderbeek closed 5 years ago

richelbilderbeek commented 5 years ago

Still running:

             JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)
           7670817   regular run_r_cm  p230198  R   18:49:14      1 pg-node137
           7670838   regular run_r_cm  p230198  R   18:49:14      1 pg-node044
           7670793   regular run_r_cm  p230198  R   18:49:15      1 pg-node012
           7670794   regular run_r_cm  p230198  R   18:49:15      1 pg-node021
richelbilderbeek commented 5 years ago

Still running

             JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)
           7670838   regular run_r_cm  p230198  R 1-13:50:04      1 pg-node044
           7670793   regular run_r_cm  p230198  R 1-13:50:05      1 pg-node012
richelbilderbeek commented 5 years ago

Note: there is already a difference:

1 particle, from 20190904:

fig_marg_liks

10 particles, from 20190912_unfinished:

fig_marg_liks

richelbilderbeek commented 5 years ago

But still: it's still running :rainbow:

richelbilderbeek commented 5 years ago

Done! It's the 20190915 run:

date mean_runtime_hours crown_age n_candidates mcmc_chain_length n_particles n_replicates mean_n_taxa mean_ess perc_low_ess dna_length
20190801 0.6439931 6 3 1111000 1 2 26.81250 552.0521 27.08333 1000
20190808 0.6791088 6 3 1111000 1 2 26.81250 541.2969 31.25000 1000
20190815 1.6287905 7 3 1111000 1 2 56.75000 463.0667 36.66667 1000
20190829 3.3101975 6 40 1000000 1 2 26.81250 421.7337 39.13043 1000
20190903 4.1418981 6 40 1000000 1 2 26.81250 429.4056 37.77778 1000
20190904 0.6348322 6 4 1000000 1 2 26.81250 478.9740 31.25000 1000
20190905 0.6264041 6 4 1000000 1 10 28.33333 502.4483 28.90295 1000
20190906 0.3879977 5 4 1000000 1 2 17.66667 610.8542 19.27083 1000
20190908 0.6437963 6 4 1000000 1 2 26.81250 478.9740 31.25000 1000
20190910 0.1362500 6 4 1000000 1 2 26.81250 583.5312 16.66667 100
20190915 16.9249306 6 4 1000000 10 2 26.81250 506.2708 30.20833 1000