'Sequence' object has no attribute 'sequence'

rigdenlab / conkit

Contact Prediction ToolKit

https://www.conkit.org/en/latest/

BSD 3-Clause "New" or "Revised" License

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'Sequence' object has no attribute 'sequence' #85

Closed FilomenoSanchez closed 3 years ago

FilomenoSanchez commented 3 years ago

General Information

ConKit version: commit ef4856027a4ae738a646f90fc1b234e0e2d5652c
Python version: 3.8

Example

$> conkit-plot cmap toxd.pdb pdb toxd.fasta fasta

Traceback

Traceback (most recent call last):
  File "/home/filo/PycharmProjects/conkit/conkit/command_line/conkit_plot.py", line 510, in <module>
    main()
  File "/home/filo/PycharmProjects/conkit/conkit/command_line/conkit_plot.py", line 325, in main
    con.sequence = seq
AttributeError: 'Sequence' object has no attribute 'sequence'

FilomenoSanchez commented 3 years ago

Actually this is not a bug, the problem was that the input was given in the wrong order... It should have been:

$> conkit-plot cmap toxd.fasta fasta toxd.pdb pdb