This PR removes the references to pako and uses fflate now. I have run tests locally and they all pass.
I chose to increment the minor version number to 0.6.0 since this is more than a bug fix/patch, but not significant enough to warrant a major version increment (no API changes).
output of tests:
NIFTI-Reader-JS
uncompressed 5D nifti-1 test
✔ isCompressed() should return false
✔ should not throw error when reading header
✔ dims[1] should be 1
✔ dims[2] should be 2
✔ dims[3] should be 3
✔ dims[4] should be 1
✔ dims[5] should be 3
✔ image size should equal 1 * 2 * 3 * 1 * 3
✔ image data checksum should equal 1033497386
NIFTI-Reader-JS
compressed 5D nifti-1 test
✔ isCompressed() should return true
✔ should not throw error when decompressing (64ms)
✔ should not throw error when reading header
✔ dims[1] should be 256
✔ dims[2] should be 256
✔ dims[3] should be 170
✔ dims[4] should be 1
✔ dims[5] should be 3
✔ image size should equal 33423360
✔ image data checksum should equal 1033497386 (126ms)
NIFTI-Reader-JS
nifti-1 big endian test
✔ isCompressed() should return true
✔ should not throw error when decompressing
✔ isNIFTI1() should return true
✔ should not throw error when reading header
✔ numBitsPerVoxel should be 32
✔ littleEndian should be false
✔ dims[1] should be 64
✔ dims[2] should be 64
✔ dims[3] should be 21
✔ image data checksum should equal 3243691439
NIFTI-Reader-JS
nifti-1 extension test
✔ should not throw error when decompressing
✔ isNIFTI1() should return true
extensionByteIndex: 360 esize: 384
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 3c 3f 78 6d 6c 20 76 65 72 73 69 6f 6e 3d 22 31 2e 30 22 20 65 6e 63 6f 64 69 6e 67 3d 22 55 54 46 2d 38 22 20 73 74 61 6e 64 61 6c 6f 6e 65 3d 22 6e 6f 22 3f 3e 3c 21 44 4f 43 54 59 50 45 20 4d 61 6e 67 6f 52 4f 49 20 53 59 53 54 45 4d 20 ... 276 more bytes>,
byteLength: 376
}
✔ should not throw error when reading header
✔ hasExtension() should return true
✔ extension length should be 376 (384 - 8)
✔ should have one extension that is 376 bytes
✔ removed extension changes the vox offset
✔ removed extension updates the vox offset
✔ added extension updates vox_offset
✔ toArrayBuffer properly allocates extension byte array
extensionByteIndex: 360 esize: 384
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 3c 3f 78 6d 6c 20 76 65 72 73 69 6f 6e 3d 22 31 2e 30 22 20 65 6e 63 6f 64 69 6e 67 3d 22 55 54 46 2d 38 22 20 73 74 61 6e 64 61 6c 6f 6e 65 3d 22 6e 6f 22 3f 3e 3c 21 44 4f 43 54 59 50 45 20 4d 61 6e 67 6f 52 4f 49 20 53 59 53 54 45 4d 20 ... 276 more bytes>,
byteLength: 376
}
✔ toArrayBuffer properly preserves extension bytes
extensionByteIndex: 360 esize: 384
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 3c 3f 78 6d 6c 20 76 65 72 73 69 6f 6e 3d 22 31 2e 30 22 20 65 6e 63 6f 64 69 6e 67 3d 22 55 54 46 2d 38 22 20 73 74 61 6e 64 61 6c 6f 6e 65 3d 22 6e 6f 22 3f 3e 3c 21 44 4f 43 54 59 50 45 20 4d 61 6e 67 6f 52 4f 49 20 53 59 53 54 45 4d 20 ... 276 more bytes>,
byteLength: 376
}
extensionByteIndex: 744 esize: 32
ArrayBuffer {
[Uint8Contents]: <08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00>,
byteLength: 24
}
✔ extensions can be added and serialized
extensionByteIndex: 360 esize: 384
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 3c 3f 78 6d 6c 20 76 65 72 73 69 6f 6e 3d 22 31 2e 30 22 20 65 6e 63 6f 64 69 6e 67 3d 22 55 54 46 2d 38 22 20 73 74 61 6e 64 61 6c 6f 6e 65 3d 22 6e 6f 22 3f 3e 3c 21 44 4f 43 54 59 50 45 20 4d 61 6e 67 6f 52 4f 49 20 53 59 53 54 45 4d 20 ... 276 more bytes>,
byteLength: 376
}
✔ extensions can be removed by index
extensionByteIndex: 360 esize: 32
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00>,
byteLength: 24
}
extensionByteIndex: 392 esize: 384
ArrayBuffer {
[Uint8Contents]: <00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 3c 3f 78 6d 6c 20 76 65 72 73 69 6f 6e 3d 22 31 2e 30 22 20 65 6e 63 6f 64 69 6e 67 3d 22 55 54 46 2d 38 22 20 73 74 61 6e 64 61 6c 6f 6e 65 3d 22 6e 6f 22 3f 3e 3c 21 44 4f 43 54 59 50 45 20 4d 61 6e 67 6f 52 4f 49 20 53 59 53 54 45 4d 20 ... 276 more bytes>,
byteLength: 376
}
✔ extensions can be inserted and serialized
NIFTI-Reader-JS
compressed nifti-1 test
✔ isCompressed() should return true
✔ should not throw error when decompressing
✔ isNIFTI1() should return true
✔ should not throw error when reading header
✔ dims[1] should be 91
✔ dims[2] should be 109
✔ dims[3] should be 91
✔ hasExtension() should return false
✔ image data checksum should equal 1033497386
NIFTI-Reader-JS
nifti-1 little endian test
✔ isCompressed() should return true
✔ should not throw error when decompressing
✔ isNIFTI1() should return true
✔ should not throw error when reading header
✔ numBitsPerVoxel should be 32
✔ littleEndian should be true
✔ dims[1] should be 64
✔ dims[2] should be 64
✔ dims[3] should be 21
✔ image data checksum should equal 4006845507
NIFTI-Reader-JS
uncompressed nifti-1 hdr/img pair test
✔ isCompressed() should return true
✔ should not throw error when decompressing header
✔ should not throw error when decompressing image
✔ isNIFTI1() should return true
✔ isNIFTI() should return true
✔ should not throw error when reading header
✔ dims[1] should be 79
✔ dims[2] should be 67
✔ dims[3] should be 64
✔ image data checksum should equal 692149477
✔ data returned from toArrayBuffer preserves all nifti-1 properties
NIFTI-Reader-JS
uncompressed nifti-1 test
✔ isCompressed() should return false
✔ isNIFTI1() should return true
✔ isNIFTI() should return true
✔ should not throw error when reading header
✔ dims[1] should be 91
✔ dims[2] should be 109
✔ dims[3] should be 91
✔ image data checksum should equal 1033497386
✔ data returned from toArrayBuffer preserves all nifti-1 properties
NIFTI-Reader-JS
nifti-2 extension test
✔ should not throw error when reading header
extensionByteIndex: 552 esize: 32
ArrayBuffer {
[Uint8Contents]: <08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00 08 00 00 00>,
byteLength: 24
}
✔ extensions can be added and serialized
NIFTI-Reader-JS
compressed nifti-2 test
✔ isCompressed() should return true
✔ should not throw error when decompressing
✔ isNIFTI1() should return false
✔ isNIFTI2() should return true
✔ should not throw error when reading header
✔ dims[1] should be 91
✔ dims[2] should be 109
✔ dims[3] should be 91
✔ image data checksum should equal 471047545
✔ data returned from toArrayBuffer preserves all nifti-2 properties
NIFTI-Reader-JS
uncompressed nifti-2 hdr/img pair test
✔ isCompressed() should return true
✔ should not throw error when decompressing header
✔ should not throw error when decompressing image
✔ isNIFTI2() should return true
✔ isNIFTI() should return true
✔ should not throw error when reading header
✔ dims[1] should be 79
✔ dims[2] should be 67
✔ dims[3] should be 64
✔ image data checksum should equal 692149477
✔ data returned from toArrayBuffer preserves all nifti-2 properties
NIFTI-Reader-JS
not-nifti test
✔ isCompressed() should return false
✔ isNIFTI() should return false
That file does not appear to be NIFTI!
✔ readHeader() should return null
108 passing (360ms)
This PR removes the references to
pakoand usesfflatenow. I have run tests locally and they all pass.I chose to increment the minor version number to
0.6.0since this is more than a bug fix/patch, but not significant enough to warrant a major version increment (no API changes).output of tests: