Removing-unnecessary-ClassVariables

[RiesBen]

Description

• This PR removes unnecessary class variables containing blocks from all Gromos File classes, as they lead to problems.
• removing not used ene_blocks, all_blocks -> also fixes the *imports in the block region.

[lgtm-com[bot]]

This pull request introduces 3 alerts and fixes 11 when merging 349e90783c9c840501c4d59aec50f20d16863199 into b70f1133e25994fdb055e05f853799d08ed8fb49 - view on LGTM.com

new alerts:

• 1 for First parameter of a method is not named 'self'
• 1 for Module imports itself
• 1 for Non-callable called

fixed alerts:

• 7 for 'import *' may pollute namespace
• 4 for Unused import

[lgtm-com[bot]]

This pull request introduces 2 alerts and fixes 11 when merging 851ca86f8b3bac07514f48bfc989669b16dcd558 into b70f1133e25994fdb055e05f853799d08ed8fb49 - view on LGTM.com

new alerts:

• 1 for First parameter of a method is not named 'self'
• 1 for Non-callable called

fixed alerts:

• 7 for 'import *' may pollute namespace
• 4 for Unused import

[codecov[bot]]

Codecov Report

Merging #235 (192cf6c) into release3 (b70f113) will decrease coverage by 0.02%. The diff coverage is 84.61%.

@@             Coverage Diff              @@
##           release3     #235      +/-   ##
============================================
- Coverage     54.71%   54.68%   -0.03%     
============================================
  Files            94       91       -3     
  Lines         13864    13859       -5     
============================================
- Hits           7585     7579       -6     
- Misses         6279     6280       +1     

Flag	Coverage Δ
unittests	54.68% <84.61%> (-0.03%)	:arrow_down:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files	Coverage Δ
pygromos/files/otherfiles/noe_output.py	0.00% <0.00%> (ø)
pygromos/files/_basics/_general_gromos_file.py	72.54% <50.00%> (ø)
pygromos/files/blocks/__init__.py	95.65% <93.75%> (-4.35%)	:arrow_down:
pygromos/files/blocks/_general_blocks.py	82.58% <100.00%> (ø)
pygromos/files/coord/posres.py	71.42% <100.00%> (ø)
pygromos/files/coord/refpos.py	66.66% <100.00%> (ø)
pygromos/files/otherfiles/residue_library.py	92.59% <100.00%> (ø)
pygromos/files/qmmm/qmmm.py	90.00% <100.00%> (ø)

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[lgtm-com[bot]]

This pull request introduces 1 alert and fixes 11 when merging 192cf6c91bf96d7a487ebe3e15ead308f3f2f03f into b70f1133e25994fdb055e05f853799d08ed8fb49 - view on LGTM.com

new alerts:

• 1 for Non-callable called

fixed alerts:

• 7 for 'import *' may pollute namespace
• 4 for Unused import