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rioyokotalab / caffe2

Caffe2 is a lightweight, modular, and scalable deep learning framework.
https://caffe2.ai
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[ReedBush] Caffe2 build (CMake) Error #21

Closed Hiroki11x closed 6 years ago

Hiroki11x commented 6 years ago

It depends on same issue

https://github.com/rioyokotalab/caffe2/issues/18

I cannot build Parallel Distributed Stable version https://github.com/rioyokotalab/caffe2/tree/3a2e09674920fa9ac124a4facd6ef90e4eea1b47

However,

I can build bellow version

commit c59f29163a15d0ccccb4a77db07f6f1da2757b76 Author: Yangqing Jia Yangqing@users.noreply.github.com Date: Thu Aug 17 00:03:53 2017 -0700

Adios CNMEM. You will be remembered.

Summary:
As part of the cuda 9 move we have decided to deprecate the cnmem path
as it seems to be superceded by cub if one needs a memory pool.
Closes https://github.com/caffe2/caffe2/pull/1104

Differential Revision: D5647672

Pulled By: Yangqing

fbshipit-source-id: 988af5bf63e24efa1b631fd91ddb58e798ffc5c6
Hiroki11x commented 6 years ago 
$ make install 
[  0%] Built target gmock
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-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/blob_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/blob_gpu_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/utility_ops_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/utility_ops_gpu_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/mpi_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/mpi_gpu_test.dir/mpi
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/elementwise_op_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/elementwise_op_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/proto_utils_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/proto_utils_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/math_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/math_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/blob_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/blob_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/elementwise_op_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/elementwise_op_gpu_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/context_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/context_gpu_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/predictor_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/predictor_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/caffe2_pybind11_state_gpu.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/caffe2_pybind11_state_gpu.dir/python
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/registry_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/registry_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/stats_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/stats_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/python_copy_files.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/workspace_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/workspace_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fixed_divisor_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fixed_divisor_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fully_connected_op_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fully_connected_op_gpu_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/context_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/context_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/graph_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/graph_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/reshape_op_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/reshape_op_gpu_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/mpi_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/mpi_test.dir/mpi
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/observer_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/observer_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/math_gpu_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/math_gpu_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fully_connected_op_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/fully_connected_op_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/net_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/net_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/boolean_unmask_ops_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/boolean_unmask_ops_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/transform_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/transform_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/string_ops_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/string_ops_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/text_file_reader_utils_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/text_file_reader_utils_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/pattern_net_transform_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/pattern_net_transform_test.dir/transforms
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/operator_schema_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/operator_schema_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/smart_tensor_printer_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/smart_tensor_printer_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/conv_op_cache_cudnn_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/conv_op_cache_cudnn_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/conv_to_nnpack_transform_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/conv_to_nnpack_transform_test.dir/transforms
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/typeid_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/typeid_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/utility_ops_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/utility_ops_test.dir/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/simple_queue_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/simple_queue_test.dir/utils
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/logging_test.dir
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/CMakeFiles/logging_test.dir/core
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/operators
-- Installing: /home/gi75/i75012/dl/caffe2/local/caffe2/operators/CMakeFiles
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/caffe2_legacy.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/hsm.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/predictor_consts.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/caffe2.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/metanet.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/include/caffe2/proto/prof_dag.pb.h
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/convert_caffe_image_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/convert_caffe_image_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/convert_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/convert_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/db_throughput
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/db_throughput"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/make_cifar_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/make_cifar_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/make_mnist_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/make_mnist_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/predictor_verifier
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/predictor_verifier"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/print_registered_core_operators
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/print_registered_core_operators"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/run_plan
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/run_plan"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/speed_benchmark
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/speed_benchmark"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/split_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/split_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/inspect_gpus
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/inspect_gpus"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/print_core_object_sizes
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/print_core_object_sizes"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/run_plan_mpi
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/run_plan_mpi"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/make_image_db
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/make_image_db"
-- Installing: /home/gi75/i75012/dl/caffe2/local/bin/tutorial_blob
-- Removed runtime path from "/home/gi75/i75012/dl/caffe2/local/bin/tutorial_blob"
Hiroki11x commented 6 years ago 
$ python -c 'from caffe2.python import core' 2>/dev/null && echo "Success" || echo "Failure"
Success
$ python -m caffe2.python.operator_test.relu_op_test
No handlers could be found for logger "caffe2.python.net_drawer"
net_drawer will not run correctly. Please install the correct dependencies.
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.05310052, -0.49276051,  0.33347145, -0.91912621, -0.07972108], dtype=float32), gc=, dc=[, device_type: 1], engine=u'')
Traceback (most recent call last):
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 529, in evaluate_test_data
    self.search_strategy, self.test,
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/executors.py", line 58, in default_new_style_executor
    return function(data)
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 115, in run
    return test(*args, **kwargs)
  File "/lustre/gi75/i75012/dl/caffe2/build/caffe2/python/operator_test/relu_op_test.py", line 26, in test_relu
    self.assertDeviceChecks(dc, op, [X], [0])
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/hypothesis_test_util.py", line 325, in assertDeviceChecks
    dc.CheckSimple(op, inputs, outputs_to_check, input_device_options)
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/device_checker.py", line 43, in CheckSimple
    input_device_options.get(op.input[i], device_option))
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/workspace.py", line 299, in FeedBlob
    return C.feed_blob(name, arr, StringifyProto(device_option))
RuntimeError: [enforce fail at common_cudnn.h:98] version_match. cuDNN compiled (5105) and runtime (7001) versions mismatch 

Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.05310052, -0.49276051,  0.33347145, -0.91912621, -0.07972108], dtype=float32), gc=, dc=[, device_type: 1], engine=u'')
Falsifying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.05310052, -0.49276051,  0.33347145, -0.91912621, -0.07972108], dtype=float32), gc=, dc=[, device_type: 1], engine=u'')
Failed to reproduce exception. Expected: 
Traceback (most recent call last):
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 529, in evaluate_test_data
    self.search_strategy, self.test,
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/executors.py", line 58, in default_new_style_executor
    return function(data)
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 115, in run
    return test(*args, **kwargs)
  File "/lustre/gi75/i75012/dl/caffe2/build/caffe2/python/operator_test/relu_op_test.py", line 26, in test_relu
    self.assertDeviceChecks(dc, op, [X], [0])
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/hypothesis_test_util.py", line 325, in assertDeviceChecks
    dc.CheckSimple(op, inputs, outputs_to_check, input_device_options)
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/device_checker.py", line 43, in CheckSimple
    input_device_options.get(op.input[i], device_option))
  File "/home/gi75/i75012/dl/caffe2/build/caffe2/python/workspace.py", line 299, in FeedBlob
    return C.feed_blob(name, arr, StringifyProto(device_option))
RuntimeError: [enforce fail at common_cudnn.h:98] version_match. cuDNN compiled (5105) and runtime (7001) versions mismatch 

Falsifying example: test_relu(X=array([-0.05310052, -0.49276051,  0.33347145, -0.91912621, -0.07972108], dtype=float32), dc=[, device_type: 1], engine=u'', gc=, self=<__main__.TestRelu testMethod=test_relu>)
E
======================================================================
ERROR: test_relu (__main__.TestRelu)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/lustre/gi75/i75012/dl/caffe2/build/caffe2/python/operator_test/relu_op_test.py", line 19, in test_relu
    engine=st.sampled_from(["", "CUDNN"]),
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 727, in wrapped_test
    state.run()
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 649, in run
    print_example=True, is_final=True
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/executors.py", line 58, in default_new_style_executor
    return function(data)
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 115, in run
    return test(*args, **kwargs)
  File "/home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/hypothesis/core.py", line 70, in test_or_flaky
    ) % (test.__name__, text_repr,))
Flaky: Hypothesis test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.05310052, -0.49276051,  0.33347145, -0.91912621, -0.07972108], dtype=float32), gc=, dc=[, device_type: 1], engine=u'') produces unreliable results: Falsified on the first call but did not on a subsequent one

----------------------------------------------------------------------
Ran 1 test in 1.290s

FAILED (errors=1)
Hiroki11x commented 6 years ago

I check library dependency about caffe2

$ ldd libCaffe2_GPU.so
    linux-vdso.so.1 =>  (0x00007fffedb05000)
    libcudart.so.8.0 => /lustre/app/acc/cuda/8.0/lib64/libcudart.so.8.0 (0x00007fffecc2f000)
    libCaffe2_CPU.so => /home/gi75/i75012/dl/caffe2/build/caffe2/libCaffe2_CPU.so (0x00007fffec2a9000)
    libprotobuf.so.8 => /usr/lib64/libprotobuf.so.8 (0x00007fffebf97000)
    libpthread.so.0 => /usr/lib64/libpthread.so.0 (0x00007fffebd7b000)
    libglog.so.0 => /home/gi75/i75012/env/local/glog-0.3.4/lib/libglog.so.0 (0x00007fffebb4b000)
    libgflags.so.2.2 => /home/gi75/i75012/env/local/gflags-2.2.0/lib/libgflags.so.2.2 (0x00007fffeb92b000)
    liblmdb.so => /home/gi75/i75012/env/local/lmdb-LMDB_0.9.18/lib/liblmdb.so (0x00007fffeb716000)
    libopencv_core.so.2.4 => /home/gi75/i75012/env/local/opencv-2.4.13/lib/libopencv_core.so.2.4 (0x00007fffeb26b000)
    libopencv_highgui.so.2.4 => /home/gi75/i75012/env/local/opencv-2.4.13/lib/libopencv_highgui.so.2.4 (0x00007fffeaed2000)
    libopencv_imgproc.so.2.4 => /home/gi75/i75012/env/local/opencv-2.4.13/lib/libopencv_imgproc.so.2.4 (0x00007fffea9e2000)
    libmpicxx.so.12 => /lustre/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpicxx.so.12 (0x00007fffea7c1000)
    libmpifort.so.12 => /lustre/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpifort.so.12 (0x00007fffea418000)
    libmpi.so.12 => /home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/release_mt/libmpi.so.12 (0x00007fffe9708000)
    libdl.so.2 => /usr/lib64/libdl.so.2 (0x00007fffe9503000)
    librt.so.1 => /usr/lib64/librt.so.1 (0x00007fffe92fb000)
    libcurand.so.8.0 => /lustre/app/acc/cuda/8.0/lib64/libcurand.so.8.0 (0x00007fffe5392000)
    libcublas.so.8.0 => /lustre/app/acc/cuda/8.0/lib64/libcublas.so.8.0 (0x00007fffe29e1000)
    libcuda.so.1 => /usr/lib64/libcuda.so.1 (0x00007fffe1fec000)
    libnvrtc.so.8.0 => /lustre/app/acc/cuda/8.0/lib64/libnvrtc.so.8.0 (0x00007fffe0bcf000)
    libcudnn.so.7 => /home/gi75/i75012/env/local/cudnn7/cuda/lib64/libcudnn.so.7 (0x00007fffd3c5e000)
    libnccl.so.1 => /home/gi75/i75012/env/local/nccl-1.3.4-1/lib/libnccl.so.1 (0x00007fffd1603000)
    libgcc_s.so.1 => /usr/lib64/libgcc_s.so.1 (0x00007fffd13ed000)
    libstdc++.so.6 => /usr/lib64/libstdc++.so.6 (0x00007fffd10e4000)
    libm.so.6 => /usr/lib64/libm.so.6 (0x00007fffd0de2000)
    libgomp.so.1 => /usr/lib64/libgomp.so.1 (0x00007fffd0bbc000)
    libc.so.6 => /usr/lib64/libc.so.6 (0x00007fffd07fa000)
    /lib64/ld-linux-x86-64.so.2 (0x0000555555554000)
    libz.so.1 => /usr/lib64/libz.so.1 (0x00007fffd05e4000)
    libjpeg.so.62 => /usr/lib64/libjpeg.so.62 (0x00007fffd038e000)
    libpng15.so.15 => /usr/lib64/libpng15.so.15 (0x00007fffd0163000)
    libtiff.so.5 => /usr/lib64/libtiff.so.5 (0x00007fffcfef0000)
    libgthread-2.0.so.0 => /usr/lib64/libgthread-2.0.so.0 (0x00007fffcfced000)
    libglib-2.0.so.0 => /usr/lib64/libglib-2.0.so.0 (0x00007fffcf9b6000)
    libnvidia-fatbinaryloader.so.375.39 => /usr/lib64/libnvidia-fatbinaryloader.so.375.39 (0x00007fffcf769000)
    libjbig.so.2.0 => /usr/lib64/libjbig.so.2.0 (0x00007fffcf55d000)

cudnn7 is linked.

Hiroki11x commented 6 years ago

I asked NVIDIA staff. Problem is that compiled CUDNN and linked CUDNN in build are different version.

In ReedBush, it is complicated environment because of module. I read module load script.

I refer bellow article. http://qiita.com/yt_siden/items/00d578781f6173ef3d91

Hiroki11x commented 6 years ago

I chended CUDA_ROOT from cuda8.0.33 to 8.0.61 which doesn't gave cudnn.

Then I tried to build

I succeeded.

-- The BLAS backend of choice:Eigen
-- Could NOT find NNPACK (missing:  NNPACK_INCLUDE_DIR NNPACK_LIBRARY PTHREADPOOL_LIBRARY) 
-- Will try to build NNPACK from source. If anything fails, follow the NNPACK prerequisite installation steps.
CMake Warning at cmake/External/nnpack.cmake:155 (message):
  NNPACK is chosen to be installed, but confu and ninja that are needed by it
  are not installed.  As a result we won't build with NNPACK.
Call Stack (most recent call first):
  cmake/Dependencies.cmake:53 (include)
  CMakeLists.txt:75 (include)

CMake Warning at cmake/Dependencies.cmake:58 (message):
  Not compiling with NNPACK.  Suppress this warning with -DUSE_NNPACK=OFF
Call Stack (most recent call first):
  CMakeLists.txt:75 (include)

-- Found gflags  (include: /home/gi75/i75012/env/local/gflags-2.2.0/include, library: /home/gi75/i75012/env/local/gflags-2.2.0/lib/libgflags.so)
-- Found system gflags install.
-- Found glog    (include: /home/gi75/i75012/env/local/glog-0.3.4/include, library: /home/gi75/i75012/env/local/glog-0.3.4/lib/libglog.so)
-- Found system glog install.
-- Found PythonInterp: /home/gi75/i75012/env/src/pyenv/shims/python (found version "2.7.9") 
-- Could NOT find Benchmark (missing:  Benchmark_INCLUDE_DIR Benchmark_LIBRARY) 
-- git Version: v0.0.0
-- Version: 0.0.0
-- Performing Test HAVE_STD_REGEX
-- Performing Test HAVE_STD_REGEX -- compiled but failed to run
-- Performing Test HAVE_GNU_POSIX_REGEX
-- Performing Test HAVE_GNU_POSIX_REGEX -- failed to compile
-- Performing Test HAVE_POSIX_REGEX
-- Performing Test HAVE_POSIX_REGEX -- success
-- Performing Test HAVE_STEADY_CLOCK
-- Performing Test HAVE_STEADY_CLOCK -- success
-- Found lmdb    (include: /home/gi75/i75012/env/local/lmdb-LMDB_0.9.18/include, library: /home/gi75/i75012/env/local/lmdb-LMDB_0.9.18/lib/liblmdb.so)
-- Could NOT find RocksDB (missing:  RocksDB_INCLUDE_DIR RocksDB_LIBRARIES) 
CMake Warning at cmake/Dependencies.cmake:139 (message):
  Not compiling with RocksDB.  Suppress this warning with -DUSE_ROCKSDB=OFF
Call Stack (most recent call first):
  CMakeLists.txt:75 (include)

-- OpenCV found (/home/gi75/i75012/env/local/opencv-2.4.13/share/OpenCV)
-- Found PythonInterp: /home/gi75/i75012/env/src/pyenv/shims/python (found suitable version "2.7.9", minimum required is "2.7") 
-- NumPy ver. 1.13.1 found (include: /home/gi75/i75012/env/src/pyenv/versions/2.7.9/lib/python2.7/site-packages/numpy/core/include)
-- Could NOT find pybind11 (missing:  pybind11_INCLUDE_DIR) 
-- MPI support found
-- MPI compile flags: 
-- MPI include path: /lustre/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/include
-- MPI LINK flags path: 
-- MPI libraries: /home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpicxx.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpifort.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/release_mt/libmpi.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpigi.a/usr/lib64/libdl.so/usr/lib64/librt.so/usr/lib64/libpthread.so
-- Adding -fopenmp
-- CUDA detected: 8.0
-- Added CUDA NVCC flags for: sm_60
-- Found libcuda: /usr/lib64/libcuda.so
-- Found libnvrtc: /home/app/acc/cuda/8.0.61/lib64/libnvrtc.so
-- Found cuDNN: v7.0.1  (include: /home/gi75/i75012/env/local/cudnn7/cuda/include, library: /home/gi75/i75012/env/local/cudnn7/cuda/lib/libcudnn.so.7)
-- Found NCCL    (include: /home/gi75/i75012/env/local/nccl-1.3.4-1/include, library: /home/gi75/i75012/env/local/nccl-1.3.4-1/lib/libnccl.so)
-- NCCL: /home/gi75/i75012/env/local/nccl-1.3.4-1/lib/libnccl.so
-- Could NOT find CUB (missing:  CUB_INCLUDE_DIR) 
-- Could NOT find Gloo (missing:  Gloo_INCLUDE_DIR Gloo_LIBRARY) 
-- MPI include path: /lustre/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/include
-- MPI libraries: /home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpicxx.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpifort.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/release_mt/libmpi.so/home/app/intel/compilers_and_libraries_2017.2.174/linux/mpi/intel64/lib/libmpigi.a/usr/lib64/libdl.so/usr/lib64/librt.so/usr/lib64/libpthread.so
-- CUDA detected: 8.0
-- Found libcuda: /usr/lib64/libcuda.so
-- Found libnvrtc: /home/app/acc/cuda/8.0.61/lib64/libnvrtc.so
CMake Warning at cmake/Dependencies.cmake:378 (message):
  mobile opengl is only used in android or ios builds.
Call Stack (most recent call first):
  CMakeLists.txt:75 (include)

CMake Warning at cmake/Dependencies.cmake:385 (message):
  Metal is only used in ios builds.
Call Stack (most recent call first):
  CMakeLists.txt:75 (include)

-- Does not need to define long separately.
-- Current compiler supports avx2 extention. Will build perfkernels.
-- GCC 4.8.5: Adding gcc and gcc_s libs to link line
-- Include NCCL operators
-- Including image processing operators
-- Excluding video processing operators due to no opencv
-- Excluding mkl operators as we are not using mkl
-- Automatically generating missing __init__.py files.
-- 
-- ******** Summary ********
-- General:
--   Git version           : 
--   System                : Linux
--   C++ compiler          : /bin/c++
--   C++ compiler version  : 4.8.5
--   Protobuf compiler     : /bin/protoc
--   CXX flags             :  -fopenmp -std=c++11 -O2 -fPIC -Wno-narrowing
--   Build type            : Release
--   Compile definitions   : CAFFE2_USE_EIGEN_FOR_BLAS;CAFFE2_USE_GOOGLE_GLOG;CAFFE2_USE_GFLAGS;EIGEN_MPL2_ONLY;CAFFE2_PERF_WITH_AVX;CAFFE2_PERF_WITH_AVX2
-- 
--   BUILD_BINARY          : ON
--   BUILD_PYTHON          : ON
--     Python version      : 2.7.5
--     Python library      : /usr/lib64/libpython2.7.so
--   BUILD_SHARED_LIBS     : ON
--   BUILD_TEST            : ON
--   USE_CUDA              : ON
--     CUDA version        : 8.0
--   USE_FFMPEG            : OFF
--   USE_GFLAGS            : ON
--   USE_GLOG              : ON
--   USE_GLOO              : ON
--   USE_LEVELDB           : OFF
--   USE_LMDB              : ON
--     LMDB version        : 0.9.18
--   USE_METAL             : OFF
--   USE_MOBILE_OPENGL     : OFF
--   USE_MPI               : ON
--   USE_NCCL              : ON
--   USE_NERVANA_GPU       : OFF
--   USE_NNPACK            : OFF
--   USE_OBSERVERS         : OFF
--   USE_OPENCV            : ON
--     OpenCV version      : 2.4.13
--   USE_OPENMP            : ON
--   USE_REDIS             : OFF
--   USE_ROCKSDB           : OFF
--   USE_THREADS           : ON
--   USE_ZMQ               : OFF
-- Configuring done
-- Generating done
-- Build files have been written to: /home/gi75/i75012/dl/caffe2/build
Hiroki11x commented 6 years ago

test 

$ python -c 'from caffe2.python import core' 2>/dev/null && echo "Success" || echo "Failure"
Success
$ python -m caffe2.python.operator_test.relu_op_test
No handlers could be found for logger "caffe2.python.net_drawer"
net_drawer will not run correctly. Please install the correct dependencies.
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([ 0.50012809, -0.27749079], dtype=float32), gc=, dc=[, device_type: 1], engine=u'')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[-0.50012809,  0.50012809],
       [-0.4662562 ,  0.41552392]], dtype=float32), gc=, dc=[, device_type: 1], engine=u'CUDNN')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[ 0.41552392,  1.        ],
       [ 0.16911869,  0.08562692]], dtype=float32), gc=, dc=[, device_type: 1], engine=u'')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[-0.41552392,  1.        , -1.        ],
       [-0.84191555, -0.9781121 ,  0.49081716]], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.77473086], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-0.43921378, -0.43921378, -0.53006005, -0.37685803], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'CUDNN')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([-1.        , -0.31397155], dtype=float32), gc=, dc=[, device_type: 1], engine=u'CUDNN')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[[[ 0.95526028, -0.24684946,  0.37793228,  0.29598975],
         [ 0.45999312,  0.45125946,  0.14892757, -0.8542428 ],
         [-0.16523594, -0.87398076,  0.41883266,  0.5042367 ],
         [ 0.21270809, -0.83780372,  0.64674163, -0.40555012]],

        [[-0.61596686,  0.33726117, -0.50418049, -0.40080076],
         [-0.24953668, -0.91717559, -0.63521922, -0.31426743],
         [-0.69821769, -0.90573871,  0.69587201,  0.4372825 ],
         [-0.2851176 ,  0.61117244,  0.1853569 ,  0.02749198]]],

       [[[ 0.225467  ,  0.35047877, -0.43227363,  0.3610425 ],
         [ 0.53903711,  0.68621081, -0.53787744,  0.26071876],
         [-0.55993092, -0.08820834,  0.99191922, -0.93406332],
         [-0.12477545,  0.92470503, -0.17252591, -0.14057891]],

        [[-0.59458274,  0.82076353,  0.72132736, -0.67835933],
         [-0.42508912, -0.25434756, -0.8063907 , -0.72533035],
         [ 0.31260556, -0.18957867,  0.03220391, -0.49019718],
         [-0.77606177, -0.78731269, -0.32717589, -0.83965635]]]], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[-0.81421566, -0.43921569, -0.18750036, -1.        ],
       [-0.81421566,  1.        , -0.99755937,  0.26562586]], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'CUDNN')
Trying example: test_relu(self=<__main__.TestRelu testMethod=test_relu>, X=array([[-0.81421578, -0.43921569],
       [-1.        , -1.        ]], dtype=float32), gc=device_type: 1, dc=[, device_type: 1], engine=u'CUDNN')
.
----------------------------------------------------------------------
Ran 1 test in 2.669s

OK