error when building package

[annasmyk]

when building package (with doc), the following occurs :

Quitting from lines 64-68 [chow_lin_example] (rjd3bench.Rmd) Error in purrr::map2(): ℹ In index: 3. Caused by error in map_lgl(): ℹ In index: 1. Caused by error in .jcall(): ! RcallMethod: cannot determine object class Backtrace:

1. rjd3bench::temporaldisaggregation(Y, indicators = x, model = "Rw")
2. rJava::.jcall(...) at rjd3bench/R/tempdisagg.R:70:2 Exécution arrêtée

Exited with status 1.

[AQLT]

I didn't have any error building the package with documentation. Maybe try updating rJava and rjd3toolkit.

[clemasso]

Hi Anna, I don't have any problems either. Have you tried the solution suggested by @AQLT ? Do you still have an issue?

[TanguyBarthelemy]

Hi I get the same problem when documenting the package with:

devtools::document(roclets = c('rd', 'collate', 'namespace', 'vignette'))

ℹ Updating rjd3bench documentation
ℹ Loading rjd3bench
✖ adl.R:3: @param requires two parts: an argument name and a
  description.
✖ adl.R:4: @param requires two parts: an argument name and a
  description.
✖ adl.R:5: @param requires two parts: an argument name and a
  description.
✖ adl.R:6: @param requires two parts: an argument name and a
  description.
✖ adl.R:7: @param requires two parts: an argument name and a
  description.
✖ adl.R:8: @param requires two parts: an argument name and a
  description.
✖ adl.R:9: @param requires two parts: an argument name and a
  description.
✖ adl.R:10: @param requires two parts: an argument name and a
  description.
✖ adl.R:11: @param requires two parts: an argument name and a
  description.
✖ adl.R:14: @return requires a value.
✖ adl.R:84: @return requires a value.
✖ benchmark.R:65: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:66: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:69: @return requires a value.
✖ benchmark.R:108: @return requires a value.
✖ benchmark.R:151: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:152: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:153: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:154: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:173: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:174: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:175: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:176: @param requires two parts: an argument name and a
  description.
✖ benchmark.R:179: @return requires a value.
✖ benchmark.R:182: @examples requires a value.
✖ calendarization.R:16: @return requires a value.
✖ mbdenton.R:95: @return requires a value.
✖ mbdenton.R:120: @return requires a value.
✖ tempdisagg.R:171: @return requires a value.
✖ tempdisagg.R:196: @return requires a value.
✖ tempdisagg.R:222: @return requires a value.
✖ tempdisagg.R:239: @return requires a value.
✖ tempdisagg.R:288: @return requires a value.
Updating vignettes
Rebuilding rjd3bench.Rmd
Error in `purrr::map2()`:
ℹ In index: 3.
Caused by error in `map_lgl()`:
ℹ In index: 1.
Caused by error in `.jcall()`:
! RcallMethod: cannot determine object class
Backtrace:
 1. rjd3bench::temporaldisaggregation(Y, indicators = x, model = "Rw")
 2. rJava::.jcall(...)
      at rjd3bench/R/tempdisagg.R:70:3

Quitting from lines 64-68 [chow_lin_example] (rjd3bench.Rmd)

On the other hand, I can build the vignette alone:

devtools::build_vignettes()

ℹ Installing rjd3bench in temporary library
ℹ Building vignettes for rjd3bench
--- re-building 'rjd3bench.Rmd' using rmarkdown

processing file: rjd3bench.Rmd
  |                                                    output file: rjd3bench.knit.md

               Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "Part of the interface to 'JDemetra+ 3.0' Seasonal adjustment software related to Temporal disaggregation and Benchmarking methods", and the latter is "Temporal disaggregation and Benchmarking methods based on JDemetra+". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.

Output created: rjd3bench.html
--- finished re-building 'rjd3bench.Rmd'

"C:/Users/UTZK0M/AppData/Local/Pandoc/pandoc" +RTS -K512m -RTS rjd3bench.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output pandoc408827ac7bde.html --lua-filter "C:\Users\UTZK0M\AppData\Local\Programs\R\R-4.4.1\library\rmarkdown\rmarkdown\lua\pagebreak.lua" --lua-filter "C:\Users\UTZK0M\AppData\Local\Programs\R\R-4.4.1\library\rmarkdown\rmarkdown\lua\latex-div.lua" --embed-resources --standalone --section-divs --table-of-contents --toc-depth 3 --template "C:\Users\UTZK0M\AppData\Local\Programs\R\R-4.4.1\library\rmarkdown\rmd\h\default.html" --highlight-style pygments --css "C:/Users/UTZK0M/AppData/Local/Programs/R/R-4.4.1/library/rmarkdown/rmarkdown/templates/html_vignette/resources/vignette.css" --mathjax --variable "mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML" --include-in-header "C:\Users\UTZK0M\AppData\Local\Temp\RtmpumdmSH\rmarkdown-str4088780d778e.html" 
ℹ Copying vignettes
ℹ Moving rjd3bench.html and rjd3bench.R to doc/
ℹ Copying rjd3bench.Rmd to doc/
ℹ Building vignette index

And there are no errors.

I get the same issue in rjd3revisions.

[clemasso]

Hi, it seems to me that devtools does not manage to find the path of the JAVA classes to run the examples included in the vignette. In the absence of better solution, I corrected the problem by setting 'eval = FALSE' in the vignette r chunks.

[AQLT]

Note that I do not have any error using devtools::document(roclets = c('rd', 'collate', 'namespace', 'vignette')). Is your JAVA_HOME environment variable correctly defined?