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rjournal / rjtools

Tools for AUTHORS to use for checking and submitting articles to the R Journal
https://rjournal.github.io/rjtools/
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Namespace errors on knitting example article. #60

Closed kristyrobledo closed 1 year ago

kristyrobledo commented 1 year ago

Hi. Im trying to run the example and knit this before writing an article.

I've installed rjtools , and run:

library(rjtools) create_article("test.Rmd") [1] "D68D5183"

then I go to the top and hit "knit" and I get this in my render window:

Error in namespaceExport(ns, exports) : undefined exports: create_article, create_blog, create_post, create_theme, create_website, distill_article, distill_website, import_post, publish_website, rename_post_dir, update_post Calls: ... do.call -> -> loadNamespace -> namespaceExport Execution halted

Not sure if this is me missing something simple? Thanks for looking into it.

Session info:

sessionInfo() R version 4.1.3 (2022-03-10) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 19045)
Matrix products: default locale: [1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 LC_MONETARY=English_Australia.1252 [4] LC_NUMERIC=C LC_TIME=English_Australia.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] rjtools_1.0.10 loaded via a namespace (and not attached):
[1] Rcpp_1.0.10 compiler_4.1.3 BiocManager_1.30.20 tools_4.1.3 digest_0.6.31
[6] jsonlite_1.8.4 evaluate_0.20 lifecycle_1.0.3 viridisLite_0.4.1 rlang_1.0.6
[11] cli_3.6.0 rstudioapi_0.14 yaml_2.3.7 hunspell_3.0.2 xfun_0.37
[16] yesno_0.1.2 fastmap_1.1.1 kableExtra_1.3.4 httr_1.4.5 stringr_1.5.0
[21] xml2_1.3.3 knitr_1.42 fs_1.6.1 vctrs_0.5.2 systemfonts_1.0.4
[26] cranlogs_2.1.1 webshot_0.5.4 svglite_2.1.0 glue_1.6.2 R6_2.5.1
[31] rmarkdown_2.20 purrr_1.0.1 magrittr_2.0.3 scales_1.2.1 htmltools_0.5.4 [36] rvest_1.0.3 colorspace_2.0-3 stringi_1.7.12 munsell_0.5.0

 

dicook commented 1 year ago

I think using “.Rmd” in the create_article() has caused the problem. Use just the stem “test”.

On 7 Mar 2023, at 3:57 pm, Kristy Robledo @.***> wrote:

Hi. Im trying to run the example and knit this before writing an article.

I've installed rjtools , and run:

library(rjtools) create_article("test.Rmd") [1] "D68D5183"

then I go to the top and hit "knit" and I get this in my render window:

Error in namespaceExport(ns, exports) : undefined exports: create_article, create_blog, create_post, create_theme, create_website, distill_article, distill_website, import_post, publish_website, rename_post_dir, update_post Calls: ... do.call -> -> loadNamespace -> namespaceExport Execution halted

Not sure if this is me missing something simple? Thanks for looking into it.

Session info:

sessionInfo() R version 4.1.3 (2022-03-10) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 19045) Matrix products: default locale: [1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 LC_MONETARY=English_Australia.1252 [4] LC_NUMERIC=C LC_TIME=English_Australia.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] rjtools_1.0.10 loaded via a namespace (and not attached): [1] Rcpp_1.0.10 compiler_4.1.3 BiocManager_1.30.20 tools_4.1.3 digest_0.6.31 [6] jsonlite_1.8.4 evaluate_0.20 lifecycle_1.0.3 viridisLite_0.4.1 rlang_1.0.6 [11] cli_3.6.0 rstudioapi_0.14 yaml_2.3.7 hunspell_3.0.2 xfun_0.37 [16] yesno_0.1.2 fastmap_1.1.1 kableExtra_1.3.4 httr_1.4.5 stringr_1.5.0 [21] xml2_1.3.3 knitr_1.42 fs_1.6.1 vctrs_0.5.2 systemfonts_1.0.4 [26] cranlogs_2.1.1 webshot_0.5.4 svglite_2.1.0 glue_1.6.2 R6_2.5.1 [31] rmarkdown_2.20 purrr_1.0.1 magrittr_2.0.3 scales_1.2.1 htmltools_0.5.4 [36] rvest_1.0.3 colorspace_2.0-3 stringi_1.7.12 munsell_0.5.0

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you are subscribed to this thread.

cheers, Di

Dianne Cook @.***

kristyrobledo commented 1 year ago

thanks @dicook. I tried
create_article("test") then "knit" and unfortunately got the same error. I did try the github version of rjtools as well as CRAN, same error.

dicook commented 1 year ago

Oh, someone suggested you need to install distill then.

On 7 Mar 2023, at 5:07 pm, Kristy Robledo @.***> wrote:

thanks @dicook. I tried create_article("test") then "knit" and unfortunately got the same error. I did try the github version of rjtools as well as CRAN, same error.

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you were mentioned.

cheers, Di

Dianne Cook @.***

kristyrobledo commented 1 year ago

thanks - I uninstalled distill, turned computer off and on again, reinstalled and viola. Thanks - ill close the issue!