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rjpbonnal
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bioruby-ngs
This plugins is intended to wrap the common software used for Next Generation Sequencing data
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Bump activerecord from 3.2.13 to 6.1.7.1
#58
dependabot[bot]
opened
1 year ago
0
Bump git from 1.2.5 to 1.13.0
#57
dependabot[bot]
opened
1 year ago
0
Bump nokogiri from 1.5.9 to 1.13.9
#56
dependabot[bot]
opened
1 year ago
0
Bump addressable from 2.3.4 to 2.8.1
#55
dependabot[bot]
opened
1 year ago
0
Bump tzinfo from 0.3.37 to 0.3.61
#54
dependabot[bot]
opened
2 years ago
0
Bump activerecord from 3.2.13 to 5.2.8.1
#53
dependabot[bot]
closed
1 year ago
1
Bump nokogiri from 1.5.9 to 1.13.6
#52
dependabot[bot]
closed
1 year ago
1
Bump git from 1.2.5 to 1.11.0
#51
dependabot[bot]
closed
1 year ago
1
Bump nokogiri from 1.5.9 to 1.13.4
#50
dependabot[bot]
closed
2 years ago
1
Bump nokogiri from 1.5.9 to 1.13.3
#49
dependabot[bot]
closed
2 years ago
2
Bump nokogiri from 1.5.9 to 1.12.5
#48
dependabot[bot]
closed
2 years ago
1
Bump rdoc from 4.0.1 to 6.3.2
#47
dependabot[bot]
opened
3 years ago
0
Bump addressable from 2.3.4 to 2.8.0
#46
dependabot[bot]
closed
1 year ago
1
Bump nokogiri from 1.5.9 to 1.11.4
#45
dependabot[bot]
closed
2 years ago
1
Bump json from 1.7.7 to 2.3.0
#44
dependabot[bot]
opened
4 years ago
0
Bump rack from 1.5.2 to 2.2.3
#43
dependabot[bot]
opened
4 years ago
0
Bump rake from 10.0.4 to 12.3.3
#42
dependabot[bot]
opened
4 years ago
0
Bump nokogiri from 1.5.9 to 1.10.8
#41
dependabot[bot]
closed
3 years ago
1
Bump rack from 1.5.2 to 2.0.8
#40
dependabot[bot]
closed
4 years ago
1
Bump nokogiri from 1.5.9 to 1.10.5
#39
dependabot[bot]
closed
4 years ago
1
Fix typographical error(s)
#38
orthographic-pedant
opened
8 years ago
0
Tophat: fastq.gz and generic paired names
#37
rjpbonnal
opened
12 years ago
0
Shift to Trimmomatic
#36
fstrozzi
opened
12 years ago
2
Keep installed binaries/compiled application when reinstalling
#35
rjpbonnal
opened
12 years ago
0
Create new reference annotation merging different gtf files
#34
valeria11
opened
12 years ago
0
ActiveRecord 3.2.5 problems
#33
fstrozzi
opened
12 years ago
0
support demultiplexing
#32
valeria11
opened
12 years ago
1
Conventional names for files
#31
rjpbonnal
opened
12 years ago
0
Tasks that do not depend on project:new
#30
rjpbonnal
opened
12 years ago
0
Use gnuplot?
#29
rjpbonnal
opened
12 years ago
1
Create Requirements for README
#28
rjpbonnal
opened
12 years ago
1
Use Markdown for documentation
#27
rjpbonnal
closed
12 years ago
2
Update README
#26
rjpbonnal
closed
12 years ago
0
user can install tools after installation
#25
rjpbonnal
closed
12 years ago
0
field separator
#24
valeria11
closed
12 years ago
0
Remove qseq tasks
#23
fstrozzi
opened
12 years ago
2
Support Cufflinks 1.2.0
#22
rjpbonnal
closed
12 years ago
0
PKG-CONFIG error in Mac OS X
#21
fstrozzi
opened
12 years ago
0
Can not execute third party software
#20
rjpbonnal
closed
12 years ago
0
Support new CASAVA 1.8
#19
rjpbonnal
opened
13 years ago
0
Support BioLinux
#18
rjpbonnal
closed
13 years ago
1
Minor fix for quality task.
#17
robsyme
closed
13 years ago
1
BioNGS background jobs (EXPERIMENTAL)
#16
fstrozzi
closed
12 years ago
1
scatter plot for cufflinks quantification values
#15
valeria11
closed
13 years ago
0
Implementation of Homology and Ontology classes
#14
fstrozzi
closed
13 years ago
0
wrapper parameters or arguments
#13
rjpbonnal
closed
12 years ago
1
Fixed a bug for hash options frozen
#12
fstrozzi
closed
13 years ago
0
Validate directory/project structure before running a task
#11
rjpbonnal
opened
13 years ago
0
Wrapper: add documentation
#10
rjpbonnal
closed
12 years ago
1
External programs need to find other programs
#9
rjpbonnal
closed
13 years ago
1
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