rki-mf1 / cievad

A tool suite for a simple, streamlined and rapid evaluation of variant callsets
https://github.com/rki-mf1/cievad
GNU General Public License v3.0
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Replace binary of amplisim with (bio)conda installation #25

Closed Krannich479 closed 8 months ago

Krannich479 commented 1 year ago

The Snakemake rule to run amplisim is currently using a compiled binary. This must be changed to a conda installation before release.

Ideally, this will be solved along with Issue #19 .

Minimal changes:

Krannich479 commented 8 months ago

Amplisim will be subject to upgrades regarding the amplicon template simulation. Until then, amplicon data simulation will be postponed.