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rki-mf1 / clean

A nextflow pipeline for decontamination of short reads, long reads and contigs
BSD 3-Clause "New" or "Revised" License
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Set default branch to 'main' instead of the Nextflow default 'master' #92

Closed matthuska closed 5 months ago

matthuska commented 5 months ago

This came up in relation to changing the default branch within GitHub. I don't think that would have made a difference for Nextflow, because the hard coded default branch is 'master'. This commit changes that default for the clean pipeline to the 'main' branch.

See: https://www.nextflow.io/docs/latest/config.html#scope-manifest

MarieLataretu commented 5 months ago

Looks good to me!

(I never changed manifest.defaultBranch, e.g., in CovPipe2, which uses main instead of master and never had problems, but it makes sense for sure!)