ModuleNotFoundError: No module named 'Bio'

[silenus092]

In GitLab by @hoelzer on Jun 2, 2021, 16:38

I just cloned the repo and run

conda env create -n sonar -f sonar.env.yml
conda activate sonar

Then I tried:

./test.sh

which ended up in

Traceback (most recent call last):
  File "./sonardb.py", line 11, in <module>
    from Bio.SeqUtils.CheckSum import seguid
ModuleNotFoundError: No module named 'Bio'

Same for

 ./sonar.py --help
Traceback (most recent call last):
  File "./sonar.py", line 10, in <module>
    from lib import sonardb
  File "/home/hoelzerm/git/covsonar/lib/sonardb.py", line 11, in <module>
    from Bio.SeqUtils.CheckSum import seguid
ModuleNotFoundError: No module named 'Bio'

I am pretty sure it worked for me in the morning. :) Any hint? Thx!

[silenus092]

In GitLab by @hoelzer on Jun 2, 2021, 17:06

solvd by creating a new terminal session on sebio -.- come on