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rkweku / miRador

Plant miRNA identification tool that utilizes a variety of filters to validate predicted miRNAs
GNU General Public License v3.0
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If I have bowtie in my conda environment, Can I keep bowtiePath empty in miRador.ini? #9

Open Ryvesselt opened 11 months ago

Ryvesselt commented 11 months ago

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The Question is the same as other softwares like blastn.

rkweku commented 11 months ago

Yes, if the tools are always in your PATH then there is no need to specify the path to miRador. I typically ran it that way myself actually. Let me know if you have problems with this. I'll leave the issue open for now.

Ryvesselt commented 11 months ago

Thanks. I haven't run it yet. So another question is what format of input can be adapted? Unclean reads in fastq or unique tags in fasta？