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rlabduke / MolProbity

Protein and nucleic acid validation service
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oneline-analysis does not work #21

Open antonkulaga opened 1 year ago

antonkulaga commented 1 year ago

When I run oneline-analysis I get:

PHP Warning:  Undefined array key "SERVER_NAME" in /home/antonkulaga/MolProbity/config/config.php on line 12
PHP Fatal error:  Array and string offset access syntax with curly braces is no longer supported in /home/antonkulaga/MolProbity/lib/model.php on line 752
chrissciwilliams commented 1 year ago

MolProbity is unfortunately dependent on legacy PHP code. Efforts to upgrade the system are ongoing. In the meantime, I can provide instructions for how to install a compatible version of PHP on Ubuntu.

https://launchpad.net/~ondrej/+archive/ubuntu/php

sudo apt install software-properties-commo sudo add-apt-repository -y ppa:ondrej/php sudo apt update sudo apt list --upgradable sudo aptitude install php5.6 php -v

We apologize for the inconvenience.

-Christopher Williams ---Richardson Lab, Duke University

On Wed, Aug 17, 2022 at 10:43 AM Anton Kulaga @.***> wrote:

When I run oneline-analysis I get:

PHP Warning: Undefined array key "SERVER_NAME" in /home/antonkulaga/MolProbity/config/config.php on line 12 PHP Fatal error: Array and string offset access syntax with curly braces is no longer supported in /home/antonkulaga/MolProbity/lib/model.php on line 752

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