Open liyezhou opened 4 years ago
I've read through your source code and It seems the problem is that in the ggplot function where
scale_colour_manual(breaks = sampleType,
values = c('chocolate1', 'blue')) +
should rather be
scale_colour_manual(breaks = levels(sampleType),
values = c('chocolate1', 'blue')) +
When I try to run the following code taken from the help passage of gdcCorPlot,
I get the following error message
and the output is as follows, which seem to have remove all three samples corresponding to SolidTissueNormal.![image](https://user-images.githubusercontent.com/7839839/82628036-55c2c080-9c1e-11ea-9458-66a5f8639c1c.png)