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rli012 / GDCRNATools

GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC
Apache License 2.0
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gdcRNAMerge() still doesn't work after adding “organized=FALSE” to the gdcRNAMerge() function. #18

Open baike687 opened 3 years ago

baike687 commented 3 years ago

I encountered a problem when running the codes of gdcRNAMerge(). Even though I added the “organized=FALSE” to the gdcRNAMerge() function, it still shows Errors as follows:

Error in open.connection(file, "rt") : 无法打开链结
此外: Warning message:
In open.connection(file, "rt") :
无法打开压缩文件'TCGA-STAD/RNAseq/8ce7dcbd-01a6-42d4-9641-2d3e793c7000/cdd88df9-4bd9-40a3-a701-8ea37005e04b.htseq.counts.gz'，可能是因为'No such file or directory'

It would be very helpful if someone can fix it.