rmarkello / snfpy

Similarity network fusion in Python
https://snfpy.readthedocs.io
GNU Lesser General Public License v3.0
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results of "snf.snf" is not consistent with the orginal SNFtool R package #20

Open szz65 opened 3 years ago

szz65 commented 3 years ago

I just used snf.snf() to get a similarity matrix. When I set the same K value, I just found the returning matrix is not same with the original R package.Could anyone tell me why?

Chengyuanyue commented 11 months ago

I'm having the same problem, how did you end up solving it? And I found that the size difference between the modules after clustering is too large, and some modules only have 4 samples.

tyasird commented 11 months ago

same here, did you find the problem? @Chengyuanyue @szz65 @rmarkello