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rmsandu
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segmentation-eval
Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.
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Bump certifi from 2020.6.20 to 2022.12.7
#87
dependabot[bot]
opened
1 year ago
0
Bump numpy from 1.19.0 to 1.22.0
#86
dependabot[bot]
opened
2 years ago
0
Bump pywin32 from 228 to 301
#85
dependabot[bot]
opened
3 years ago
0
Bump urllib3 from 1.25.9 to 1.26.5
#84
dependabot[bot]
closed
3 years ago
0
Bump pyyaml from 5.3.1 to 5.4
#83
dependabot[bot]
closed
3 years ago
0
correction for subcapsular lesions
#82
ipa
closed
4 years ago
0
Fixes for surface distance calculation
#81
ipa
closed
4 years ago
0
Figure 5 Ellipsoid Approximations (MIV + MEV):
#80
rmsandu
closed
4 years ago
0
Fig 4 Manuscript Histograms
#79
rmsandu
closed
4 years ago
1
Fig 3 Manuscript Pie-Chart:
#78
rmsandu
closed
4 years ago
0
Figure 1 Manuscript PAV vs EAV
#77
rmsandu
closed
4 years ago
0
Plot the 3 MWA devices in one graph with different colours
#76
rmsandu
closed
4 years ago
0
Scatter Plot with all groups
#75
rmsandu
closed
4 years ago
0
Re-compute Radiomics for M24 and B06
#74
rmsandu
closed
4 years ago
0
Vessel proximity
#73
rmsandu
closed
4 years ago
0
Send Screenshots of Axial and Coronal views for the 13 and 40 ml PAV/EAV volumes (same PAV but different EAV)
#72
rmsandu
closed
4 years ago
0
STL volumes for tumor and ablation on subcapsular lesions for liver surface segmentation
#71
rmsandu
closed
4 years ago
1
Energy (kJ) scatter plots
#70
rmsandu
opened
4 years ago
0
Make schematic drawing in PPT for miv and mev to add into the methods
#69
rmsandu
closed
4 years ago
1
Statistical tests :
#68
rmsandu
closed
4 years ago
0
Altenative subplots presentations of the graphs
#67
rmsandu
closed
4 years ago
0
Paired Boxplots
#66
rmsandu
opened
4 years ago
0
Flowchart scheme for README
#65
rmsandu
closed
4 years ago
0
Inner and Outer Ellipsoids
#64
rmsandu
closed
4 years ago
0
Quantitative ablation pipeline
#63
rmsandu
closed
4 years ago
0
Histogram Image Readme
#62
rmsandu
closed
4 years ago
0
Statistical analysis
#61
rmsandu
closed
4 years ago
0
Probabilistic Ablation Modelling
#60
rmsandu
opened
4 years ago
0
More simplistic publication ready plots
#59
rmsandu
closed
4 years ago
0
Connected bar plot for ellipsoid volumes
#58
rmsandu
closed
4 years ago
0
Ellipsoid fitting
#57
rmsandu
closed
4 years ago
0
Linear Regression Model in Python
#56
rmsandu
opened
4 years ago
0
Create DICOM segmentation mask for testing purposes:
#55
rmsandu
opened
4 years ago
0
Sphericity index
#54
rmsandu
closed
4 years ago
0
Change the interpolation method for griddata
#53
rmsandu
closed
4 years ago
1
Plot by hospital centre
#52
rmsandu
opened
4 years ago
0
Proximity to Vessels Category
#51
rmsandu
closed
4 years ago
1
Bump pillow from 6.1.0 to 6.2.0
#50
dependabot[bot]
closed
4 years ago
0
Replace EAV voxel-based with the volume of the largest enclosing ellipsoid
#49
rmsandu
closed
4 years ago
0
Plot ratio EAV:PAV (y-axis) w.r.t to the euclidean distance between the tumor center and needle target tip/ diameter of a tumor
#48
rmsandu
closed
4 years ago
0
Boxplots EAV vs PAV
#47
rmsandu
closed
4 years ago
0
Deep Lesions vs Subcapsular markers marking
#46
rmsandu
closed
4 years ago
0
EAV vs s PAV graphs :
#45
rmsandu
closed
4 years ago
0
Add Linear Regression line for each subgroup
#44
rmsandu
closed
4 years ago
0
Simulate tumor volumes with 5 and 10 margin around
#43
rmsandu
closed
4 years ago
0
Add Ranges for Tumor Volumes and Chemo Cycles
#42
rmsandu
closed
4 years ago
0
Pie chart marker for scatter plot
#41
rmsandu
closed
4 years ago
0
Publication Ready Graphs for Ablation and Energy
#40
rmsandu
opened
4 years ago
0
Perform interpolation for ablation models volumes and axis
#39
rmsandu
closed
4 years ago
0
Predict Axes with Random Forest Model:
#38
rmsandu
closed
4 years ago
0
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