All the other bioc dependencies installed just fine, but then I see:
> BiocManager::install("clustifyr")
Bioconductor version 3.11 (BiocManager 1.30.10), R 4.0.2 (2020-06-22)
Installing package(s) 'clustifyr'
trying URL 'https://bioconductor.org/packages/3.11/bioc/src/contrib/clustifyr_1.0.0.tar.gz'
Content type 'application/x-gzip' length 3063932 bytes (2.9 MB)
==================================================
downloaded 2.9 MB
* installing *source* package ‘clustifyr’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Killed
The downloaded source packages are in
‘/tmp/RtmppbsPh4/downloaded_packages’
Installation path not writeable, unable to update packages: MASS, mgcv, nlme, survival
Warning message:
In install.packages(...) :
installation of package ‘clustifyr’ had non-zero exit status
All the other bioc dependencies installed just fine, but then I see:
May just be a temporary thing.