Add data sets for readme vignette rendering

rnabioco / djvdj

An R package to analyze single-cell V(D)J data

https://rnabioco.github.io/djvdj

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Add data sets for readme vignette rendering #75

Closed jayhesselberth closed 1 year ago

jayhesselberth commented 2 years ago

The pkgdown site build is broken because we shut down AWS

sheridar commented 2 years ago

need better vignette using public data

jayhesselberth commented 1 year ago

I can't build the readme because these paths aren't available in the pacakge:

paths <- c(
  KI_DN3_GE = "data/tcr/KI_DN3_TCR/outs",
  KI_DN4_GE = "data/tcr/KI_DN4_TCR/outs",
  WT_DN3_GE = "data/tcr/WT_DN3_TCR/outs",
  WT_DN4_GE = "data/tcr/WT_DN4_TCR/outs"
)

sheridar commented 1 year ago

The current dataset that's used in the README isn't published, so it's not included in the package. I'm going to update the README to use the same dataset shown in the vignettes on the package site.