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rnajena / poseidon

PoSeiDon: positive selection detection and recombination analysis pipeline
MIT License
35 stars 10 forks source link

fasta check says illegal characters #33

Open mchaisso opened 2 years ago

mchaisso commented 2 years ago

I see the output of fasta checking:

BlueWhale_ADGRG2 HybridCattle_ADGRG2 WildYak_ADGRG2 BelugaWhale_ADGRG2 LongFinnedPilotWhale_ADGRG2 WhiteSidedDolphin_ADGRG2 YangtzeRiverDolphin_ADGRG2 Narwhal_ADGRG2 Porpoise_ADGRG2 Orca_ADGRG2 Vaquita_ADGRG2 Remove BLUEWHALE_ADGRG2 from the input because of bad characters in the sequence. Remove HYBRIDCATTLE_ADGRG2 from the input because of bad characters in the sequence. Remove WILDYAK_ADGRG2 from the input because of bad characters in the sequence. Remove BELUGAWHALE_ADGRG2 from the input because of bad characters in the sequence. Remove LONGFINNEDPILOTWHALE_ADGRG2 from the input because of bad characters in the sequence. Remove WHITESIDEDDOLPHIN_ADGRG2 from the input because of bad characters in the sequence. Remove YANGTZERIVERDOLPHIN_ADGRG2 from the input because of bad characters in the sequence. Remove NARWHAL_ADGRG2 from the input because of bad characters in the sequence. Remove PORPOISE_ADGRG2 from the input because of bad characters in the sequence. Remove ORCA_ADGRG2 from the input because of bad characters in the sequence. Remove VAQUITA_ADGRG2 from the input because of bad characters in the sequence.

PoSeiDon needs at least 3 homologous sequences as input. Your FASTA contains 0 sequence entries. Please add more sequences and try again.

There was a problem with the FASTA file (ADGRG2.fasta), stop.

However, the fasta file contents are:

BlueWhale_ADGRG2 ATGCTTTTCTCTGGTGGGCAGTGTGGCCGTGTTGGCAGACCTGAAGAACTTTTACTGACG TTCAGGATATTCCTTGTCATCATTTGTCTTCATGTCACGCTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCTCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACGATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTATTCTGTCAGGATCCCCTGCCCTTCCTCCC CGGAAGAGTTAGAAAAACTGCAGTGTGACCTGCAGGATCCCGTTGTGTGTCTTGCTGGTC ATCCACGTGGTCCACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTG TGTCCCAGACCTCCAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCACCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATA GCTTCCAGCCCTGCCATTGATATGCTCCCCGAGTCTGGAACTATCTCTTCCCCTGTGCCT CCAACTGATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACG TCTGCCCCCGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCAC ACCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGCTTCTTTCCTTA GGCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAAACTCCTTCAT TCCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATT GGCTTACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTG GCTGTGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCT GCAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACT GTGCCTTCATCGCTGATGAGTAATTTGCCAGCTAATGATGTGGAGCTGGCTTCCAGGGTG CAGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCT CTGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGA AACGTGACGGTTACATTAAAGCACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGT GTATTTTGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCT GTCAAAGACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGC GTCCTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTT ATCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTAC ATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCG GCTCTGCTCCTGCTGAACCTGGTGTTTCTCTTGGACTCGTGGATTGCTTTGTACGACATA AGAGGCCTCTGCATTTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCATTCACT TGGATGGGCCTGGAAGCGTTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTAC ATCCGCAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTG ACCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCC AACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTT GTGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTT CAACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAA GATCTCAGGAGCGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTC TTTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTA CAAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGG AGGCGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACT GCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCGAGCTCTTCAAATTCC TTACAGTCAAACAGTAATTCTACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCA GGACTCACGAGCGGAAACGCGAATGCTTCTACAGAGAAGAATGGTTTTTCTTTCAGTCTT CAGAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAA GAAGATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGC TTACACTTTATTGAGCAAATGTGA HybridCattle_ADGRG2 ATGTTTTTCTCTGGTGGGCAGTGTGGCCATGTTGGCAGACCTGAAGAACTTTTACTGATG TTTAAGATAGCCCTTGTCGTCATTTTTCTTCATATTACTCTGGTTACATCCCTGGAAGAG TATTTATAATTTTTTTTCTCCTGCAGCTGAATCATCTCTCGTTGATTTTGTCCCCTACTC CAATGGTACTCCAGATTTTAATTTAACCTTACCCCAACTTGTGTCAAACCCCAGAGAAAT ATCTGCAATTTGTCATCTATTTGCAATAACTCAGCCTTTTTTAGAGGTGAGATCATGTTT CAATATGACGAAGAAAGCAATATTACCCAGAATCAAGTTATGGCTAATGGCACGGTAACT GGAATCCTGTCTCTAAGGGAATTGAAACAATCAGAACTCAACAAAACTCTGGAAACCTTA AGTGAGACTTATTTTACAGAGTGTGATGCAGCAGAGTCCCAAAGCACAGTAAATTGTACA TTCACCATAAAATTGAATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTCCAAACA GTAAAGATTCGACCCATGGAACAGTGCTGCTGTTCTGCCAGGACCCCCTGCCCTTCCTCC CTGGAGGAGGTAAAGAAACTGCAGTGTGACCTGCAGGATCCCGTTGAGTGTCTCGCTCGT CATCCACACGGCCCACCATTTTCTTCCAGCAATCCATCCCAGTTGCTCCTCCGGCCACTG TGTCCCAGATCTCTAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCAGTTGTAACCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCACTACCTTCTCCCCAGCCTTCAGCTCCCA TAACTTCCAGCCCAGCCATTGATATGCCCCTGCCATCTGGAACTGTCTCTTCCCCTAAGC CCCACCTGTCTCCCTCACCCTGTCCCCTGGGAAGTCGTCAGCCCCCTCTCCAACCACGTC TGCCCCTGTGAACGTCAACACGACCGGCATACCTCCTGACAAGACAGAAATTGTTCATAC CAGCAGCATTTCTGATCTTGAGAACCAAGTGTCCCGGATGGAGCGGGCTCTGTCCTTAGG CAGCTTGGAGCCTAAACTCGCAGGACAAATGATAAACCAAGTCAGCCGACTCCTTCATTC TCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGG CTTACAGCTGAATTTTTCAACCAAGACAATAAGTCTGACCTCCCCTTCTTTGGCTCTGGC TGTGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGC GAATCTTCAGGTTTCTCTGGAAGCTCAGGCTCCAGAGAACAGTATTGGCGTTATTACTTT GCCTTCATCGTTGATGAGTCATTTACCAGCTGATGCTGTGGAGCTGGCTTCCAGGGTGCA GTTCAACTTTTTTGAAACTCCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCT GATCAGCTATGTCATTTCCTCAAGCGTTGCGAACCTGACAGTCAAGAACTTGACAAGAAA CGTGACGGTTACCTTAAAGCATATCGACCCGAGCCAGGATGTCTTAACAGTGAGATGTGT ATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGT CAAAGACAGGAGGCTGAATGAGACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGT TCTGCTGGACTTGTCTCGAACATCCTTGCCACCAGCTCAGATGATGGCCCTAACATTTAT TACCTATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTTACTCTTGTAACCTACAT AGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGCGCAGC CCTGCTCCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAG AGGCCTCTGCATCTCAGTGGCTGTATTTCTGCATTATTTTCTCTTGGTCTCATTCACATG GATGGGCTTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACAT CCGAAAATACATCCTTAAATTCTGCATTTTTGGTTGGGGCATCCCAGCTGTGGTTGTGGC CATCGTCCTGATTATATCTCCAGATAACTATGGGCTTGGATCCTATGGGAAATTCCCCAA CGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATCACGGTTGT GGGGTATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCA GCTCTGTCGAATTAAAAGGAAGAAGCAACTGGGAGCCCAGAGAAAAACTAGTATTCAAGA CCTCAGGAGCGTCGCTGGCCTTACATTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTT TGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTCAATACCTTACA AGGATTTTTCATATTCGTCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGAG GCGATATCTGTGTTGTGGAAAGTTACGACTGGCGGAAAATTCTGACTGGAGTAAGACTGC TACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGGGTCTCCAGCTCTTCAAATTCCTT ACAGTCAAACAGTAACTCCACCCACTCCACCACGCTGCTAGTGAATAACGATTGCTCAGG ACTTGCCAGCGGGAACGGGAATGCTTCTACAGAGAAGAATGGTGTTTCTTTCAGTGTTCA GAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCATATATTTAATGAGAAAGA AGATTCCTGCAGTGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTT ACACTTTATTGAGCAAATGTGA WildYak_ADGRG2 ATGTTTTTCTCTGGTGGGCAGTGTGGCCATGTTGGCAGACCTGAAGAACTTTTACTGATG TTTAAGATAGCCCTTGTCGTCATTTTTCTTCATATTACTCTGGTTACATCCCTGGAAGAA GATGCTCATTTTCCTTTATCTTTTTTTCTGTTTTATCAGTTGTCAGTTTAACCCGCTGGG TTGTGTTTTCTTTGCAGGTGTCAAACCCCAGAGAAATATCTGCAATTTGTCATCTATTTG CAATAACTCAGCCTTTTTTAGAGGTGAGATCATGTTTCAATATGACGAAGAAAGCAATAT TACCCAGAATCAAGTTATGGCTAATGGCACGGTAACTGGAATCCTGTCTCTAAGGGAATT GAAACAATCAGAACTCAACAAAACTCTGGAAACCTTAAGTGAGACTTATTTTACAGAGTG TGATGCAGCAGAGTCCCAAAGCACAGTAAATTGTACATTCACCATAAAATTGAATAAGAC AATGAACATATGTGCTGTGATGGTTGCTTTCCAAACAGTAAAGATTCGACCCATGGAACA GTGCTGCTGTTCTGCCAGGACCCCCTGCCCTTCCTCCCTGGAGGAGGTAAAGAAACTGCA GTGTGACCTGCAGGATCCCGTTGAGTGTCTCGCTCGTCATCCACACGGCCCACCATTTTC TTCCAGCAATCCATCCCAGTTGCTCCTCCGGCCACTGTGTCCCAGATCTCTAGTGCCTTC TCTTTTGCTGAGCCTCTAGCTCATCCAGTTGTAACCCAGAGCCCTCACTCTCCAACAGGG GTGATTCCACTACCTTCTCCCCAGCCTTCAGCTCCCATAACTTCCAGCCCAGCCATTGAT ATGCCCCTGCCATCTGGAACTGTCTCTTCCCCTAAGCCCCACCTGTCTCCCTCACCCTGT CCCCTGGGAAGTCGTCAGCCCCCTCTCCAACCATGTCTGCCCCTGTGAACGTCAACACGA CCGGCATACCTCCTGACAAGACAGAAATTGTTCATACCAGCAGTATTTCTGATCTTGAGA ACCAAGTGTCCCGGATGGAGCAGGCTCTGTCCTTAGGCAGCTTGGAGCCTAAACTCGCAG GACAAATGATAAACCAAGTCAGCCGACTCCTTCATTCTCCGCCCACCTTGCTGGCCCCTT TGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTACAGCTGAATTTTTCAACCA AGACAATAAGTCTGACCTCCCCTTCTTTGGCTCTGGCTGTGATCAGAGTAAATGCCAGTA ATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGCGAATCTTCAGGTTTCTCTGGAAG CTCAGGCTCCTGAGAACAGTATTGGCGTTATTACTTTGCCTTCATCGTTGATGAGTCATT TACCAGCTGATGCTGTGGAGCTGGCTTCCAGGGTGCAGTTCAACTTTTTTGAAACTCCTG CCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATCAGCTATGTCATTTCCTCAA GCGTTGCGAACCTGACAGTCAAGAACTTGACAAGAAACGTGACGGTTACCTTAAAGCATA TCGACCCGAGCCAGGATGACTTAACAGTGAGATGTGTATTTTGGGACTTGGGCAGAAATG GTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAAGACAGGAGGCTGAATGAGA CCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTTCTGCTGGACTTGTCTCGAACAT CCTTGCCACCAGCTCAGATGATGGCCCTAACATTTATTACCTATATTGGTTGTGGGCTTT CATCAATTTTTCTGTCAGTTACTCTTGTAACCTACATAGCCTTTGAAAAGATCCGGAGGG ATTACCCTTCCAAAATCCTCATCCAGCTGTGCGCAGCCCTTTTTTCCTGGTGTTCCTCTT GGACTCGTGGATTGCTTTGTATGACATAAGAGGCCTCTGCATCTCAGTGGCTGTATTTCT GCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCTTGGAAGCATTCCATATGTACCT GGCCCTTGTCAAAGTGTTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCATTTT TGGTTGGGGCATCCCAGCTGTGGTTGTGGCCATCGTCCTGATTATATCTCCAGATAACTA TGGGCTTGGATCCTATGGGAAATTCCCCAACGGGTCACCTGATGACTTTTGCTGGATCAA TAGCAATGCTGTATTCTATATCACGGTTGTGGGGTATTTCTGTGTGATATTTTTGCTGAA CGTCAGCATGTTCATTGTGGTCCTGGTTCAGCTCTGTCGAATTAAAAGGAAGAAGCAACT GGGAGCCCAGAGAAAAACTAGTATTCAAGACCTCAGGAGCGTCGCTGGCCTTACATTTTT ACTAGGAATTACTTGGGGCTTTGCCTTCTTTGCCTGGGGACCAGTTAATGTCACCTTCAT GTATCTCTTTGCCATCTTCAATACCTTACAAGGATTTTTCATATTCGTCTTTTACTGTGT AGCAAAAGAGAATGTCAGAAAGCAGTGGAGGCGATATCTGTGTTGTGGAAAGTTACGACT GGCGGAAAATTCTGACTGGAGTAAGACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAA CCAAGGGGTCTCCAGCTCTTCAAATTCCTTACAGTCAAACAGTAACTCCACCCACTCCAC CACGCTGCTAGTGAATAACGATTGCTCAGGACTTGCCAGCGGGAACGGGAATGCTTCTAC AGAGAAGAATGGTGTTTCTTTCAGTGTTCAGAATGGAGATGTGTGCCTCCATGATTTCAC TGGAAAACAGCATATATTTAATGAGAAAGAAGATTCCTGCAGTGGTAAAAACCGTATCGC TCTAAGAAGGACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGA BelugaWhale_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGGCCATGTTGGGAGACCTGAGGAACTTTTACTGATG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACAATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCC CGGAAGAGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCCGTTGTGTGTCTTGCTGGTC ATCCACATGGTACACCATTTTCTTCCAGCAATTCCATCCCGGTTGCTCCTCAGGCCACTG TGTCCCAGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATA GCTTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGTGCCT CCAATTCATCTTTCCCACACCTTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACG TCTGCCCCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCAC ACCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGGTTCTTTCCTTA GGCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCAT TCCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATT GGCTTACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTG ACTGTGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCT GCAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACT CTGCCTTCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTG CAGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCT CTGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGA AACGTGACGGTTACATTAAAGCACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGT GTATTTTGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCT GTCAAAGACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGC GTCCTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTT ATCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTAC ATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCA GCTCTGCTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATA AGAGGCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACT TGGATGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTAC ATCCGAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTG ACCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCC AACGGGTCACCTGATGACTTTTGTTGGATCAACAGCAATGCTGTATTCTATATTACGGTT GTGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTT CAACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAA GATCTCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTC TTTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACATTA CAAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGG AGACGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACT GCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCAAGCTCTTCAAATTCC TTACAGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCA GGACTCACGAGCGGAAACGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTT CAGAATGGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAA GAAGATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGC TTACACTTTATTGAGCAAATGTGA LongFinnedPilotWhale_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGGCCATGTTGGGAGACCTGAGGAACTTTTACTGACG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAA GTATTAATAATTTTTTTTTCTCCTGCAGCTGAATCATCTCTTGTTGGTTTTGTCCCCTAC TCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATATCTGCA ATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCGTGTTTCAATATG ATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGTACCTCAACTGGAATCC TGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAAGTGAGA CTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACATTCACAA TAAAACTGCATAAGACAATGAACATATGTACTGTGATGGTTGCTTGGCAAACAGTAAAGA TTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCCCGGAAG AGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCCGTTGTGTGTCTTGCTGGTCATCCAC ATGGTACACCATTTTCTTCCAGCAATTCCATCGCAGTTGCTCCTCAGGCCACTGTGTCCC AGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCCAGAGCC CTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATAGCTTCC AGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGTGCCTCCAACT CATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACGTCTGCC CCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCACACCAGC AGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAAGTTCTTTCCTTAGGCAGC TTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCATTCCCCG CCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTA CAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTGACTGTG ATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCTCAAGACCCTGCAAAT CTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACTCTGCCT TCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTGCAGTTC AACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATC AGCTATGTCATTTCCTCGAGTGTGGCGAACCTGACAGTCAAGAATTTGACAAGAAACGTG ACGGTTACATTAAAGCACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGTGTATTT TGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAA GACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTCCTA CTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTTATCACC TATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTACATAGCC TTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCAGCTCTG CTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAGGC CTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACTTGGATG GGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCCGA AAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTGACCATT GTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCCAACGGG TCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTTGTGGGA TATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAACTT TTTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAAGATCTC AGGAGTGTTGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTTGCC TGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACGTTACAAGGA TTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAACGTCAGAAAGCAGTGGAGACGG TATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACTGCTACT AATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCGAGCTCTTCAAATTCCTTACAG TCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGACTC ACGAGCGGAAACGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTTCAGAAT GGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAAGAAGAT GCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTTACAC TTTATTGAGCAAATGTGA WhiteSidedDolphin_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGGCCATGTTGGGAGACCTGAGGAACTTTTACTGACG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAA GTATTAATAATTTTTTTTTCTCCTGCAGCTGAATCATCTCTTGTTGGTTTTGTCCCCTAC TCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATATCTGCA ATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTCAATATG ATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGTACCTCAACTGGAATCC TGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAAGTGAGA CTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACATTCACAA TAAAACTGCATAAGACAATGAACATATGTACTGCGATGGTTGCTTGGCAAACAGTAAAGA TTCGACGGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCCCGGAAG AGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCTGTTGTGTGTCTTGCTGGTCATCCAC ATGGTACACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTGTGTCCC AGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCCAGAGCC CTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATAGCTTCC AGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTATGCCGCCAACT CATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACGTCTGCC CCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCACACCAGC AGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAAGTTCTTTCCTTAGGCAGC TTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCATTCCCCG CCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCTTA CAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTGACTGTG ATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCTCAAGACCCTGCAAAT CTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACTCTGCCT TCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTGCAGTTC AACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTCTGATC AGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGAAACGTG ACGGTTACATTAAAGCACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGTGTATTT TGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTGTCAAA GACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTCCTA CTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTTATCACC TATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTACATAGCC TTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCAGCTCTG CTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAGGC CTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACTTGGATG GGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCCGA AAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTGACCATT GTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCCAACGGG TCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTTGTGGGA TATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAACTT TTTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAACGAAAAACCAGTATTCAAGATCTC AGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTTGCC TGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACGTTACAAGGA TTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAACGTCAGAAAGCAGTGGAGACGG TATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACTGCTACT AATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCGAGCTCTTCAAATTCCTTACAG TCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGACTC ACGAGCGGAAATGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTTCAGAAT GGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAAGAAGAT TCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCTTACAC TTTATTGAGCAAATGTGA YangtzeRiverDolphin_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGACCATGTTGGCAGACCTGAAGAACTTTTACTGACG TTAAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTCCTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGGTCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACAATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCC CGGAAGAGTTAGAAAAACTGCAGTGTGACGTGCAAGATCCCGTTGTGTGTCTTGCTGGTC ATCCACATGGTACACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTG AGTCCCAGACCTCCAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCAGCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATA GCTTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGCGCCT CCAACTCATCTTTCCCACACCCTGCCACCTGTGAAATCCGTACCTCCCTCTCCCACCACG TCTGCCCCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCAC ACCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGGTTCTTTCCTTA GGCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCAT TCCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATT GGCTTACAGCTGAATTTTTCAACCAAGACCGTAAGTCTGACCTCCCCTTCTTTGGCTCTG GCTGTGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCT GCAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAACAGTATTGGTGTTATTACT CTGCCTTCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTG CAGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCT CTGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGA AACGTGACGGTTACATTAAAGCACGTCCACCGGAGCCAGGATGACTTAACAGTGAGATGT GTATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTTT GTCAAAGACAGGAGGCTAAATGAAACCACCTGTACCTGTAGCCACCTTACAAGCTTCGGC GTCCTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTT ATCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTAC ATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCG GCTCTGCTGCTGCCGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATA AGAGGCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACT TGGATGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTAC ATCCGAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTG ACCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCC AACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTT GTGGGATATTTCTGTGTGATATTTTTGCTGAATGTCAGCATGTTCATTGTGGTCCTGGTT CAACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAA GATCTCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTC TTTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTA CAAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGG AGACGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACT GCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTGTCGAGCTCTTCAAATTCC TTACAGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCA GGACTCACGAGTGGAAACGCGAACGCTTCTACAGAGAAGAATGGTTTTTCTTTCAATCTT CAGAATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAA GAAGATTCTTGCAGTGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGC TTACACTTTATTGAGCAAATGTGA Narwhal_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGACCATGTTGGGAGACCTGAGGAACTTTTACTGATG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCGATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACAATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGTTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCC CGGAAGAGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCCGTTGTGTGTCTTGCTGGTC ATCCACATGGTACACCATTTTCTTCCAGCAATTCCATCCCGGTTGCTCCTCAGGCCACTG TGTCCCAGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTTCTCCCCAGCCTTCAGCTCCCATA GCTTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGTGCCT CCAATTCATCTTTCCCACACCTTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACG TCTGCCCCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCAC ACCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGGTTCTTTCCTTA GGCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCAT TCCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATT GGCTTACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTG ACTGTGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCT GCAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACT CTGCCTTCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTG CAGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCT CTGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGA AACGTGACGGTTACATTAAAGCACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGT GTATTTTGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCT GTCAAAGACAGGAGGCTAAATGAAACTACCTGTACCTGCAGCCACCTTACAAGCTTCGGC GTCCTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTT ATCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTAC ATAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCA GCTCTGCTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATA AGAGGCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACT TGGATGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTAC ATCCGAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTG ACCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCC AACGGGTCACCTGATGACTTTTGTTGGATCAACAGCAATGCTGTATTCTATATTACGGTT GTGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTT CAACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAA GATCTCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTC TTTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACGTTA CAAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGG AGACGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACT GCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCAAGCTCTTCAAATTCC TTACAGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCA GGACTCACGAGCGGAAACGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTT CAGAATGGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAA GAAGATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGC TTACACTTTATTGAGCAAATGTGA Porpoise_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGGCCATGTTGGGAGACCTGAGGAACTTTTACTGACG TTCAAGATATTCCTTGTCATCATTTGTCTTCGTGTCACTGTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGGATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACAATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGCTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCC TGGAAGAGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCCGTTGTGTGTCTTGCTGGTC ATCCACATGGTACACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTG TGTCCCAGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTCTCCCCACCCTTCAGCTCCCGTAG CTTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGTGCCTC CAACTCATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACGT CTGCCCCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACAGAAATTGTTCACA CCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGCTTCTTTCCTTAG GCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCATT CCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTG GCTTACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTGA CTGTGATCAGAGTGAATGCCAGTAATTTTGACACGACTACTTTTGCTGCCCAAGATCCTG CAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACTC TGCCTTCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTGC AGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTC TGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGAA ACGTGACGGTTACATTAAAGCACATCCACGGGAGCCAGGATGGCTTAACAGTGAGATGTG TATTTTGGGACTTGGGCAGAAACGGCGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTG TCAAAGACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCG TCCTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTTA TCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTACA TAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCAG CTCTGCTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAA GAGGCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACTT GGATGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACA TCCGAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTGA CCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCCA ACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTTG TGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTC AACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAAG ATCTCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTCT TTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACGTTAC AAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGA GACGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACTG CTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCAAGCTCTTCAAATTCCT TACAGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCAG GACTCACGAGCGGAAACGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTTC AGAATGGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAAG AAGATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCT TACACTTTATTGAGCAAATGTGA Orca_ADGRG2 ATGCTTTTCTCTGGCGGGCAGTGTGGCCATGTTGGCAGACCTGAAGAACTTTTACTGACG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTATGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTAC AGTATGATGAAGAAAGCAATGTTACCCAGAATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAGCGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTCATAGTGTGTGCTACAGCAGAGACCCAAAGCACATTAAATTGTACAT TCACAATAAAACTACATAAGACAATGAACATGTGCTGTGATGGAATCTTTGCAAACAGTA AAGATTCGACCAATGGAACAGTGCTGCTGTCCTGTCAGCTTCCCCTGCCCTTCCTCCCCG GAAGAGTTAGAAAAACTGCAGTGTGACCTGCAGGATCCTGTTGTGTGTCTTGCTCGTCAT CCACATGGTCCACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTGTG TCCCAGACCTCCAGTGCCTTCTCTTTTGCTGAGCCTCTAGCTCATCCACCTGTAATCCAG AGCCCTCACTCTCCAACAACAGTGATTCCCCTTTTCTCCCCAGCCTTCAGTTCCCATAGC TTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAGCTGTCTCTTCCCCTGTGCCTCC AACCGATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCGCGTC TGCCCCTGTGACTGTCAACACGACCAGCATACCTCCTAACGAGACAGAAATTGTTCACAC CAGCAGCATTTCTGAGCTTGAGAACCAAGTGTTGGATGGAGAAGGTTCTTTCCTTAGGCA GTGTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAAACTCCTTCATTCCC CGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTGGCT TACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTGGCTG TGATCAGAGTGAATGCCAGTAATTTTGACACAACTACTTTTGCTGCCCAAGACCCTGCAA ATCTTCAGGTTTCTTTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACTCTGC CTTCATCGCTGATGAGTAATTTACCAGCTAACGATGTGGAGCTGGCTTCCAGGGTGCAGT TCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACGTCTCTCTGA TCAGCTATGTCATCTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGAAACG TGACGGTTACATTAAAACACATCCACCGGAGCCAGGATGACTTAACAGTGAGATGTGTAT TTTGGGACTTGGGCAGAAACGGTGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTATCA AAGACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCGTCC TACTGGACTTGTCTCGAACATCCTTGCCACCAGCTCAGATAATGGCCCTGACATTTATCA CCTATATTGGCTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTACATAG CCTTTGAGAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCAGCTC TGCTCCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAAGAG GCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTGTCATTCACTTGGA TGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACATCC GAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTGACCA TTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCCAACG GGTCACCTGATGACTTCTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTTGTGG GATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAAC TTTGTCGAATTAAAAAGAAGAAGCAACTGGGGGCCCAGCGAAAAACCAGTATTCAAGATC TCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTCTTTG CCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACCTTACAAG GATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGAGGC GGTATCTGTGCTGTGGAAAGTTACGCCTGGCTGAAAATTCTGACTGGAGTAAAACTGCTA CTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCGAGCTCTTCAAATTCCTTAC AGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCAGGAC TCACGAGCGGAAACGCGAATGCTTCTACAGAGAAGAATGGTTTTTCTTTCAGTCTTCAGA ATGGAGATGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAAGAAG ATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTACAAAGCGGGGAAGCTTAC ACTTTATTGAGCAAATGTGA Vaquita_ADGRG2 ATGCTTTTCTCTGGCAGGCAGTGTGGCCATGTTGGGAGACCTGAGGAACTTTTACTGACG TTCAAGATATTCCTTGTCATCATTTGTCTTCATGTCACTGTGGTTACATCCCTGGAAGAG CATGCTGATAATTCCAGTTTGTTATCACCTTCTGCTGAATCATCTCTTGTTGGTTTTGTC CCCTACTCCAATGGTACTCCAGGCAAGATTTTGAAAAAAGTGTCAAACCCCAGAGAAATA TCTGCAATTTGTCATCTATTTGCAATGACTCAGCCTTTTTTAGAGGTGAGATCATGTTTC AATATGATGAAGAAAGCAATGTTACCCAGGATCAAGTTATGGCTAATGGCACCTCAACTG GAATCCTGTCTCTAAGGGAATTGAAACGATCAGAACTCAACAAAACCCTGCAAACTTTAA GTGAGACTTATTTTATAGTGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTACAT TCACAATAAAACTGCATAAGACAATGAACATATGTGCTGTGATGGCTGCTTTGCAAACAG TAAAGATTCGACCGATGGAACAGTGCTGCTGTTCTGTCAGGATCCCCTGCCCTTCCTCCC TGGAAGAGTTAGAAAAACTGCAGTGTGACGTGCAGGATCCCGTTGTGTGTCTTGCTGGTC ATCCACATGGTACACCATTTTCTTCCAGCAATTCCATCCCAGTTGCTCCTCAGGCCACTG TGTCCCAGACCTCCAGTGCCTTCTCTTTTACTGAGCCTCTAGCTCATCCATCTGTAATCC AGAGCCCTCACTCTCCAACAGGGGTGATTCCCCTTTCTCCCCACCCTTCAGCTCCCGTAG CTTCCAGCCCTGCCATTGATATGCTCCCCCAGTCTGGAACTATCTCTTCCCCTGTGCCTC CAACTCATCTTTCCCACACCCTGCCACCTGTGAAATCCTTACCTCCCTCTCCCACCACGT CTGCCCCTGTGAATGTCAACACGACCAGCACACCTCCTGACAAGACGGAAATTGTTCACA CCAGCAGTGTTTCTGAGCTTGAGAACCAAGTGTCCCGGATGGAGAAGCTTCTTTCCTTAG GCAGCTTGGAGCCTAACCTCGCAGGACAAATGATAAACCAAGTCAGCAGACTCCTTCATT CCCCGCCCACCTTGCTGGCCCCTTTGGCCCAAAGATTGCTAAAAGTAGTGGATGACATTG GCTTACAGCTGAATTTTTCAACCAAGACCATAAGTCTGACCTCCCCTTCTTTGGCTCTGA CTGTGATCAGAGTGAATGCCAGTAATTTTGACACGACTACTTTTGCTGCCCAAGATCCTG CAAATCTTCAGGTTTCTCTGGAAACTCAGGCTCCTGAGAATAGTATTGGTGTTATTACTC TGCCTTCTTCGCTGATGAGTAATTTACCAGCTAATGATGTGGAGCTGGCTTCCAGGGTGC AGTTCAACTTTTTTGAAACACCTGCCCTGTTTCAGGACCCTGCCTTGGAGAACCTCTCTC TGATCAGCTATGTCATTTCCTCGAGCGTGGCGAACCTGACAGTCAAGAATTTGACAAGAA ACGTGACGGTTACATTAAAGCACATCCACGGGAGCCAGGATGGCTTAACAGTGAGATGTG TATTTTGGGACTTGGGCAGAAACGGCGGCAGAGGAGGCTGGTCATCTGATGGCTGCTCTG TCAAAGACAGGAGGCTAAATGAAACCACCTGTACCTGCAGCCACCTTACAAGCTTCGGCG TCTTACTGGACTTGTCTCGAACATCCTTGCCACCGGCTCAGATAATGGCCCTGACATTTA TCACCTATATTGGTTGTGGGCTTTCATCAATTTTTTTGTCAGTTACTCTTGTAACCTACA TAGCCTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCAG CTCTGCTGCTGCTGAACCTGGTGTTCCTCTTGGACTCGTGGATTGCTTTGTATGACATAA GAGGCCTCTGCATCTCAGTGGCTATATTTCTGCATTATTTTCTCTTGGTCTCGTTCACTT GGATGGGCCTGGAAGCATTCCATATGTACCTGGCCCTTGTCAAAGTGTTTAATACTTACA TCCGAAAATACATCCTTAAATTCTGCATTGTTGGTTGGGGGGTACCAGCTGTGGTTGTGA CCATTGTCCTGATTATATCTCCAGATAACTATGGACTTGGATCCTATGGGAAATTCCCCA ACGGGTCACCTGATGACTTTTGCTGGATCAACAGCAATGCTGTATTCTATATTACGGTTG TGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTC AACTTTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAAG ATCTCAGGAGTGTCGCTGGCCTTACGTTTTTACTAGGAATTACTTGGGGCTTTGCCTTCT TTGCCTGGGGACCAGTTAATGTCACCTTCATGTATCTCTTTGCCATCTTTAACACGTTAC AAGGATTTTTCATATTCATCTTTTACTGTGTAGCAAAAGAGAATGTCAGAAAGCAGTGGA GACGGTATCTGTGTTGTGGAAAGTTACGACTGGCTGAAAATTCTGACTGGAGTAAAACTG CTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTCTCAAGCTCTTCAAATTCCT TACAGTCAAACAGTAACTCCACCCAGTCCACCACGCTGCTAGTGAATAATGATTGCTCAG GACTCACGAGCGGAAACGCGAATGCTTCTACCGAGAAGAATGGTTTTTCTTTCAGTCTTC AGAATGGAGACGTGTGCCTCCATGATTTCACTGGAAAACAGCACATGTTTAATGAGAAAG AAGATTCCTGCAATGGTAAAAACCGTATCGCTCTAAGAAGGACTTCAAAGCGGGGAAGCT TACACTTTATTGAGCAAATGTGA

hoelzer commented 2 years ago

Hi! If the content you pasted is really the one from your FASTA the sequence names are missing the leading > symbol. Please check that you have a proper FASTA file:

>Orca_ADGRG2
AGCTAGCTACGTACGAC...
>Vaquita_ADGRG2
GTACGTAGCTACGACGAA...

In addition, your sequences should present a correct ORF so the translation into amino acids can properly work.

mchaisso commented 2 years ago

Shoot, that was me not pasting as code and git interpreting > as quote. They have the ">" as a normal fasta file.

Some are missing start codons, but I'm fixing that separately.

hoelzer commented 2 years ago

Ah, I see ;) Yeah, I think PoSeiDon also checks for a proper start codon. But most importantly that your sequences can be divided by 3 and present a proper ORF. Also, for obvious cases PoSeiDon should give a better error message to figure out why certain sequences are sorted out.

hoelzer commented 2 years ago

See comments here for checks that are performed: https://github.com/hoelzer/poseidon/blob/master/bin/fasta_format_checker.rb