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rnakato / ShortCake

A docker image for single-cell analysis
https://hub.docker.com/r/rnakato/shortcake
GNU General Public License v3.0
68 stars 13 forks source link

Dockerfile.full #13

Open joseagraz opened 2 weeks ago

joseagraz commented 2 weeks ago

Dear Professor Nakato,

Building the docker image for Dockerfile.full fails, resolved the issue by changing jaxlib==0.1.75 to jaxlib==0.3.7

I also added support for doubletdetection && micromamba run -n scvi-scgen-scmomat-unitvelo pip install --no-cache-dir doubletdetection \

Thanks

rnakato commented 5 days ago

Thank you for your help. I've updated ShortCake to v3.1.0 where the jaxlib version is 0.3.7. I've confirmed that the build completes without errors.