robbert-harms / MDT

Microstructure Diffusion Toolbox
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very low MD values after fitting Tensor Model #27

Closed SanRut closed 4 years ago

SanRut commented 4 years ago

Dear Harm,

I fitted the tensor model on my DWI data and the resulting MD values are rather low, in the order of 1e-9. I wanted to ask whether these low values are normal. In your NeuroImage (2017) paper, I see that the diffusion is expressed in seconds per meter, should I also interpret the MD values at this scale?

Thank you, best wishes,

Sanne

robbert-harms commented 4 years ago

Hi Sanne,

Yes, MDT uses SE units (seconds, meters, etc.) when representing the data. As such, the Tensor diffusivities, as well as the FA and MD are represented in m^2/s, while the typical units are in mm^2/s. You can simply rescale the FA by 1e6 to get the typical range of units (mm^2/s).

Best wishes,

Robbert

SanRut commented 4 years ago

Hi Harm,

Thanks so much for your quick and helpful reply.

Best wishes, Sanne