Test

[PolonaCa]

Non-expert GUI: I used a raw NKI image.

1. SPM bone-processing resulted in an error:

Bone Preprocessing:
  Tissue Probability Map:   1 (Adult TPM)
  Preprocessing   method:   1 (SPM)
  Bone processing method:   2 (Surface-based)
  Verbose processing:       1 (Yes)
  Report:                   3 (Yes - Details)

                                                                           scan:     Tw    Tbg   Tfat   Tres   Tcnr |  vBmar  vBcor   vBth   vHth  vHmed |  sBmar  sBcor   sBth   sHth  sHmed |  Tbcor  Tbmar  Tbdns
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
    ------------------------------------------------------------------------
     WARNING 01:  boney_segment_evalSPMseg:badSPMcls4
                  Bad SPM tissue class 4 - probably underestimated (0.22)
    ------------------------------------------------------------------------
29-Sep-2023 15:42:50 - Failed  'Bone segmentation'
Unrecognized field name "classic".
In file "/Users/polona/Downloads/spm12/toolbox/boney/boney_segment.m" (???), function "boney_segment" at line 388.

The following modules did not run:
Failed: Bone segmentation

2. CAT bone processing resulted in the same error:

Bone Preprocessing:
  Tissue Probability Map:   1 (Adult TPM)
  Preprocessing   method:   2 (CAT)
  Bone processing method:   2 (Surface-based)
  Verbose processing:       1 (Yes)
  Report:                   3 (Yes - Details)

                                                                           scan:     Tw    Tbg   Tfat   Tres   Tcnr |  vBmar  vBcor   vBth   vHth  vHmed |  sBmar  sBcor   sBth   sHth  sHmed |  Tbcor  Tbmar  Tbdns
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29-Sep-2023 15:59:03 - Failed  'Bone segmentation'
Unrecognized field name "classic".
In file "/Users/polona/Downloads/spm12/toolbox/boney/boney_segment.m" (???), function "boney_segment" at line 388.

The following modules did not run:
Failed: Bone segmentation

[robdahn]

Corrected in new version.

[robdahn]

Done.